Detail information of Asa6G06129


Location
GeneChrStartEndStrand
Asa6G06129chr617049531461704954088-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRWR89613.13.9e-86zinc finger protein MAGPIE
SwissprotQ9ZWA6.15.5e-77Protein indeterminate-domain 3
trEMBLA0A443PFQ42.8e-86Zinc finger protein MAGPIE

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G03840.189.513e-79 291MGPC2H2 and C2HC zinc fingers superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag139161.t1; g307190.t1; g421878.t1; g466583.t1; g90843.t1
Allium fistulosumAfisC1G02792; AfisC2G02955; AfisC3G03342; AfisC5G01276; AfisC6G00311; AfisC7G03397
Allium sativumAsa5G02884.1; Asa6G06129.1
Arabidopsis thalianaAT1G03840.1; AT1G03840.2; AT4G02670.1; AT5G44160.1
Oryza sativaLOC_Os01g09850.1; LOC_Os01g09850.2; LOC_Os01g09850.3; LOC_Os01g14010.1; LOC_Os02g45054.2; LOC_Os02g45054.3; LOC_Os02g45054.4; LOC_Os10g28330.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12309GLB1, ELNR1; beta-galactosidaseEC:3.2.1.23 Galactose metabolismko00052
Sphingolipid metabolismko00600
Glycosaminoglycan degradationko00531
Glycosphingolipid biosynthesis - ganglio seriesko00604
Other glycan degradationko00511
Lysosomeko04142

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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