Detail information of Asa6G06346


Location
GeneChrStartEndStrand
Asa6G06346chr617623582631762363607-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263178.14.4e-125PHD finger protein EHD3-like
SwissprotQ6ZJM9.12.8e-84Proetin EARLY HEADING 3
trEMBLA0A5P1F4302.3e-112PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G77250.133.643e-60 230RING/FYVE/PHD-type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag416681.t1
Allium fistulosumAfisC5G00881
Allium sativumAsa6G06346.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain34539731.61e-07
PF00628.26PHDDomain52857342.93e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13196DPF2, REQ; zinc finger protein ubi-d4EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.