result

Gene information

Detail information of Asa6G06564

Location

Gene	Chr	Start	End	Strand
Asa6G06564	chr6	1821141065	1821143549	-

Sequences

CDS

Protein

Gene

>Asa6G06564.1
ATGAACAAAAAACTTAGGCTAAGGATCACAAATGCAATCTCAAGCACATTCAGCTCATGCAAACCCAAAAACGACACCACCATGAACCCTGCTCAAGTCTTTTACCTCTCCCCTTCCAACCCCAAAATCCACGACATCGAGTTCCCAACTCCGCCTCCTCCTCCACGTTCTTCGCCTTCCCGCCGCCTCTCCTCCGTCCTTGCCCCGAGGTGGGAGGAGGACATGGACGACTTGTCTCGAGCTCGCTCCACGCCCGGGTATTTATGGCGCAAGGATGAGAAATGGCTTGCTGTCACCACCGTGTCTAATGGAGATGGACTTCAGACGTTTCGTACAAGGCCAAAGATCGATTGCCAAATTAATGAACTTGTCCATGATGAGGACGACGAAGATGATGATCAGTTTGACCATGTTGTGAAATTAGCTTCAAGAAGGTATAATAATTAGCCGTACTGCACACTTTACCCATTTTCACAACTTTCAAAAGACCCAgctatttctttatttttataggTTTTGAATAGGATATATGGTCTGAAACATGGATTGTTATTTTTTTAACCAGGTTGGcaggaaaaatatgttttttttttccccaaaaacttatgtataattttttaaaagtatttaaatgGCAAATTTGTCTGTGTATTAGTTTACAAGTTTTCTAATTAGTGATGAGAAATATATACATGGATTTCACAACTCATGCTGTCAAATGattgataaaatatatttcattaaacGCCCTCAAATATCCAAAAACTAAGTCCAATGAGCTATTACGATCATTAATTACACTTTGTTTGGTAATTAAGTAGGACCACTTTTAGAAACATATTTCATGCTTTAAACAGTTAAAAACTAGATAAAAATTCTCATTTGAACCCAAAAGCTCAAATTTGAgaatgaaatatccctttttattataaggtcatataaataataaataaataaataaaatggttcatCTATGTATACTATAAGATAATTGATCATTTTAGCTCACAATTCAAAACAGAGAACAAATTTAATATAGCTTCAAATTATATTAGGATATATATACCCTATTAACCTATTGTTTGGAGGTATATTAAATCAGCTATTTGCTCATGCTCAATTTGGATATGCCCTAAGCTAGTTtcgtttagattttttttttttaaccctaTCACATTATCGAGGTGCAACATGAAAAAAATATAACTATAATAATGTTtgatagggctgttatggtaatggttaccgttaccgtttgacaaataccgttcccgtaccgtttttactggtaagtcagtattgcttaccgttaccgatcgactggtataccgatgactggtataccgatacactggtaatggtaaattaccgtttgtccaataaagtttatatcttaacatattttttgtacacggTATGTCTTTactatactatatgtagtgttagtttataaaaaacataaatgaaaaagaaaataagtgtatctagaaatatttcatttgattattgaaccaaatatgatcatttatttggttctacgtgcttgtaataaagcatatcagatgagtatacttatgttttgaattaactggtaaaattaccgttaccgctggtatttaAGAAActttaccgataatttaccgttaaaaatggtaaatttaccgttaccataccgttttaactggtataccgattttaatgaaatatgcttaccgattgactggtaatggtatggtaatggtaaatttaccgttaccgtaacagccctaatgTTTGAAATGAGCTTAAGTTGGTTTAATGATTTGAAATGCAGGCTAGATTAACAAATAAAGAACTAAacagataaaattctattttagttttgaatgtatatatacatacataggaGCACACAAACTAGTGACGAAGAATATTGATAATTGATATCATGTAtaggagaagagagaaggaaatGAGGAGACGAGCTCAAACAAGAGGAAGAAAATCAAGATCAAAAAGCAGAAACAGCACGTCGTCAATGGCGAGCACAGGCACATGGTTCTCAAGCGGCGATGACAACGAGAGGGAGGATGAGGATTTGTACTACAATGATGATGAGGGGGATGACACAGACACATTGCTATCATCTAAAAGCTTTGAAGGAGATTCTTCTAGAATCAAACAACCAAGAGCAGCTGTATCTTCGGGATATGCAACTGCGATGTTGAGTAGGATTTGTGGAGGTGATGAAGGAAGAGTGAAGGAAAGCTTTGCAGTAGTGAAGAGATCGGAAGATCCAAGAGGCGATTTTAGAAGATCCATGGCGGAGATGGTGGTGGAGAAAGGCATTTATGAAGCTGAGGACTTGGAGCAGCTGCTGCATTGCTTTTTGTCATTGAATCATAACCAGCATCATGATGCTATTATTTCTGCTTTTGCTGATATCTGGGATGCTCTTTTTCCTCAGATTTCACCTCGTTTTAGTGGTGACATgaataaagtttga

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008795663.1	2.2e-27	transcription repressor OFP7-like
Swissprot	Q94CV1.1	6.5e-13	OVATE family protein 8
trEMBL	A0A8B7CBK6	1.6e-27	Transcription repressor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G18500.1	55.41	4e-19	92.4	ATOFP7;OFP7	ovate family protein 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G06564	AT2G18500.1	74	33	239	312	217	290	55.41	4e-19	92.4
Asa6G06564	AT5G19650.1	66	28	248	313	154	219	57.58	2e-18	90.5
Asa6G06564	AT2G30400.1	67	30	246	312	250	316	55.22	1e-15	80.9

Ortholog group

Species	Genes
Allium cepa	g481483.t1
Allium fistulosum	AfisC5G00618
Allium sativum	Asa6G06564.1
Arabidopsis thaliana
Oryza sativa	LOC_Os03g10150.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04844.10	Ovate	Family	256	313	87.9	2.9e-25

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K01870	IARS, ileS; isoleucyl-tRNA synthetase	EC:6.1.1.5	Aminoacyl-tRNA biosynthesis	ko00970

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network