Detail information of Asa6G06667


Location
GeneChrStartEndStrand
Asa6G06667chr618471324631847138082-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241351.11.4e-95E3 ubiquitin-protein ligase MIEL1-like
SwissprotQ8VZK0.12.3e-82RING-type E3 ubiquitin transferase MIEL1
trEMBLA0A2I0VYH99.0e-92RING finger and CHY zinc finger domain-containing protein 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G18650.167.052e-101 365MIEL1CHY-type/CTCHY-type/RING-type Zinc finger protein

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Ortholog group
SpeciesGenes
Allium cepag102667.t1; g538065.t1
Allium fistulosumAfisC1G02747; AfisC5G00636
Allium sativumAsa6G05375.1; Asa6G06667.1; Asa7G05619.1
Arabidopsis thalianaAT5G18650.1
Oryza sativaLOC_Os03g22680.1; LOC_Os03g22680.2; LOC_Os12g35320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05495.9zf-CHYDomain218258.09.3e-16
PF13639.3zf-RING_2Domain13617935.48.3e-09
PF14599.3zinc_ribbon_6Domain18524185.61.5e-24

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K10144RCHY1, PIRH2; RING finger and CHY zinc finger domain-containing protein 1EC:2.3.2.27 Ubiquitin mediated proteolysisko04120
p53 signaling pathwayko04115

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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