Detail information of Asa6G06992


Location
GeneChrStartEndStrand
Asa6G06992chr619361954221936201259-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008795402.12.4e-213homeobox-leucine zipper protein ROC5
SwissprotQ6EPF0.16.3e-182Protein RICE OUTERMOST CELL-SPECIFIC 5
trEMBLA0A8B7CB578.7e-213homeobox-leucine zipper protein ROC5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G00730.158.240.0 702AHDP;ANL2Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag288422.t1; g530912.t1
Allium fistulosumAfisC5G00212; AfisC8G05032
Allium sativumAsa1G00799.1; Asa6G06992.1
Arabidopsis thalianaAT3G61150.1; AT4G00730.1
Oryza sativaLOC_Os02g45250.1; LOC_Os04g48070.1; LOC_Os04g48070.2; LOC_Os04g48070.3; LOC_Os09g35760.1; LOC_Os09g35760.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain10415968.92.2e-19
PF01852.16STARTDomain305530173.14.5e-51

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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