result

Gene information

Detail information of Asa6G07011

Location

Gene	Chr	Start	End	Strand
Asa6G07011	chr6	1941869678	1941873385	-

Sequences

CDS

Protein

Gene

>Asa6G07011.1
ATGGCCTCTCTTCTTCCTCCCCCATCGACAAACATTCGTAAATTACACAACTTTGCACACTTCTCATCTCCAACCAAAACCGTAGCATCAAAATGCAACGCAACAAACGGTGAAAGCTTGGATAATTTCATTATAAACACACTGAACCTTAGTGAAGCAAACCCTACATTCCCAATAGTAAAATCCGGACTCGATCAGTACAGCAAACTACTATCGGAAACACCAGGCTTCGAAAAATGGGGAGTAGCGTTAATAATCGGACTTGGTTGGGTCTACTTAACTGCAAGGCCGGGCGTACTATTGGGTGCAATCGATGCGTATTTTTTGGCTCCATTGCAATTAGGGTTTGATGTGTTGCTTGGAAGAAGAAACCTCAAAATGGGGGATTTCATTGTCGGTGAAAAATTGGGTGAAGGATCGTTTGGTGTTGTTTACGCAGGCGCAGTTGTAGGTGCAAATTTTAGCGTGGAGGAGAGAGTTGGCAAAATGGGGAAGAAGTTGGGTAAGGACGATCGGTACAAGCAAAGAGTCATTTTGAAAAAGGTATTgttttttttagtttgattttcaCAGTTAATTCTTGGTTGGAAAATTTACCATGATTATTAGACTATAACCATTAAGGCATTGCCAATCCCACTTGTGCATACAATGTAAAGTGGTATAATtgtcaaatgaatatttttcattaaaattcgCCTGTAATGTCAATGCTAGATTGAaccaatttgaatttttgaaaacaatttcattgaAACGaccttttttaataaaaaaaattatttcatttcctatGCATTGTGACTtcttaaatataattgaattaaccTTATGAAATGTCTCTGTACACATAAACTTTACTTGAAATTACATGTTGTTTGCATTGGAGATGTCTAGGGAGGCTAAAATGAATTGATGTCTTGGAAAGATAGGTTGTTGCAAAACCAACAGTTGTATATAAAAGTTAACCTCATGTCCAATATTGGAAAGATGAATATACATAAACCTACCTTGTGTAAAGTTAGACTGCATGAAAAAGATATCTGTAACATAACAGGTTAAGATTGGAACAGTTGGAGCAGAAGAATGTGGAGATTATGAAGAGTGGTTCAACTACAGAATTTCTAGAGCAGCTCCTGAAACAAGTGCTGAGTTTCTTGGCAGTTTTGTAGCTGAAAGAACTGTATCTCAATTCACCAAAGGTGGCAAATGGCTTGTCTGGAAGTTTGAGGTATGTGATTTCATACTAAGAAATTGATATATTTAATacaagtggaaaataggcataaggacaaactttgaaaaaaaattaagtctagaggacgtcaagttttatttttaggttgaaggacaaactttgaaaaaaattaggctgaaggacaatgttaaatataattagcattttctgtagtgtaaaactgaataatgctaattacatttagcattttcgtgtagtgtaaaaagctgaatataatgctaattatatttagcattttccttcagcttaattttggtttaaagtttgtccttcggactaaaaataaaacttggtgtctttcagcctaatttttcggcaaagtttgtccttctccctaattacctcttaaTACAAAGTGTACAGCGATACATTATATCATATGTATTCAGGGTGACAGGGACTTAGCCGACTACATGAAAGACAGAAGCTTTCCTGTAAACTTGGAATCCATAATGTTTGGTCGTGTCTTACAAGGGCTGGACTCGATGAAGCGCAATGCCCTTATCATAAAGCAAATAATGCGACAAATAATAACATCTCTTAAGAAAATTCACGACAATGGCATAGTGCATAGGGACATTAAGCCTTCTAACTTGGTGGTAACAAGGAAGGGAAAGATCAAGCTTATAGATTTTGGTGCAGCCACTGATCTTCGTATAGGAAAAAATTACGTTCCAAATAAAGGATTGCTTGACCCTGATTATTGCCCTCCTGAATTATATGTTATGCCTGAGGAAACACCAGAACCTCCAGCAGAGCCCATTGCTGCCATACTTTCTCCAATTTTATGGCAGGTTTGTGTTTATTCCTAACATACATCTAGAcattgcatgtgtgtgtgtgtgtatgctatACATAATTTGAATTTTGCGTAACTCCCTAATTTCCGTCTTGGGCTGTTGAGAATTAAATCTGATTCTGTCAATATTAAAAGGTTGTCTGTTAATTAGTTACTTATTTTGTAGTGGGTTAAAGTAAGCAAAACAGAGACTAGTTTGGATAATGTTATAACGATGGATATATTGTAGATTTATCTTATCTAAAGTTTCCTAAAGAGATGTTTAGAGGTGGGAGCCTGCTATTTGTTCCGTCTAAAATTCTTCCTAAACCCagttaaaggggggggggggggggggggataccGCCAAAATCCACTTCAACCATAACCTCTTTTGTTCCTTGTTCCGCAAAGACAAAATTCTTACTCAATCTATGACAAAAAACCAAtaagggaaaagaaaaaggaaaaaattgggatggaaaGCTTTAAATACTTTGATTGATTTGGAGAGCATACCTGCTTTTCGATTTACACTCATTGATTCAtaagtttgatttgattttgtgaaGGAATTCAACTAAGACCAACTTAAGTTAAGGTTCTACAACGGAACCCTAGAATTAAACATCAAGAAAGGGTCTTGGATGAAGCTTAgttgctttgatttgaatataaattattcctCGCTCGCTAAGTTTCGCGATATAAAGGAATTGTTTGTTTTTTTTGCTTTCTGTTTTATTAGTAAAGTAATAAGGTGGTGTGTGTGGGTTTAGGAACATACATATAATAATTTAAGCGGGTGATGAGAGTGTGGACATAGCGAGATGAAAAGTGATTGTGTGTAGTTGATCATGTAATAACTGTAGAAACTCTTTTGAATTCTCATGTTCTATATAAGAtatttatatagaagaaatatggAGAGGTGTGTTCCATTTTCTAAGCAAGCAAAGAtgcccaaaaaataaaaataaagtaagaaatgTTGTGGTGAAGTATCTCACACTCGCTCAAACACACATCATCAAACTTGAATCCTTACACACAGTAATATCGTTTTCATTTCGATGCCTGTCCAATTTTAACTACTGGATTGACAATTGCCTTCATGACCTTGTTGCTGGTTttgcttttgaaaaaaaagaaatgattttatgcCAAGTATGTGAAAGACCCAAGATTAAACTAAAAAAATGTATATGTATCCTTAATAAACATATATGTCTGTGTAATTTTCAACTTGTACATGTACAACTGACATTTTTGTTTCCATAAAGATGGAAGCTTGACATGGCAAATGCATTAATTTTGTTCACAGCTTAACAGCCCAGATTTGTACGACACATACTCAGCTGAGATTATACTAATGCAAATGGCGGTTCCGTCGATGAGATCAACTGCAGGACTCAGGAACTTCAACGCAGAGATTAAAAGAGTGGGTTACGACTTGAATAAATGGAGGAATTCGACCAGATCAAGGCCAGACCTGAGCATATTAGATTTGGATTCAGGGAGAGGGTGGGATTTGGCGACAAAGCTTGTGTCTGAGAGAGGTTCTTTCAGGAGAGGAAGGCTATCTGCTTCCGCTGCATTAAGGCATCCTTATTTCCTTTTAGGTGGAGATCAGGCTGCAGCTGTGCTGTCTAAGTTCAGTTTGAGCAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243870.1	4.4e-210	serine/threonine-protein kinase STN8, chloroplastic
Swissprot	Q9LZV4.1	8.4e-182	Protein STATE TRANSITION 8
trEMBL	A0A6I9R8U7	4.7e-206	serine/threonine-protein kinase STN8, chloroplastic

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G01920.1	66.21	0.0	630	STN8	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G07011	AT5G01920.1	506	143	8	1	489	1	495	66.21	0.0	630
Asa6G07011	AT1G68830.1	476	241	13	24	488	36	469	38.24	3e-74	276
Asa6G07011	AT5G63370.3	362	210	16	121	471	149	459	24.86	4e-10	63.2

Ortholog group

Species	Genes
Allium cepa	g384695.t1
Allium fistulosum	AfisC5G00234; AfisC5G00258
Allium sativum	Asa6G07010.1; Asa6G07011.1
Arabidopsis thaliana	AT5G01920.1
Oryza sativa	LOC_Os05g40180.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	275	349	67.6	9.6e-19

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08798	MARK; MAP/microtubule affinity-regulating kinase	EC:2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network