result

Gene information

Detail information of Asa6G07086

Location

Gene	Chr	Start	End	Strand
Asa6G07086	chr6	1964609848	1964611331	-

Sequences

CDS

>Asa6G07086.1
ATGCCATTTAATGCTCTTTCATGCAACTCATCCAAAACACATCAACTTTTATCGCTCTTCAATGTGTCTTATTTCACTTTCGATCGAGGAGCAGCAGCCAGGTACGATTACAATACAAGTGTTGAAGCTTGCAAGCAAGCATGTTTGGCAAACTGTTCTTGCAAAGCTGCATTTTTTCTATATTATAAGTTTGGTTTAGGACCTAATTATTGTTACTTGGAATACAAGTTGTACTCGTTGAACAGCAATCTACCAGATTATTTGGATGTAATCAATTCATCTGCATTTATCAAAGTGAAATCATTTCCTACTACAGATACGGCACCTAGAACAAACTCGAGCAACTCCGACTTTATAAGTGAAGTTAGGATTGTTATAGCTAGCGCTATCGTCCCATTTCTACTTGCTTTTATTCCTATCATTGCATGCGTCATAGCTTTTATTTGCTTTGAAGATCTTAGGGTTGCTACTGACGACTTCTTACGAAAACTTGGGGAAGGTGGATTCGGTTCTGTTTTCGGGGAAACACTAATCGATGGCACTAAGATAGCCGTTAAAAAATTGGATGGTGCTGGTCAAGGTAAAAAAGAATTTTTAGCCGAGGTTGAAACCATTGGTAGCATTCATCATGTACATTTGGTGAGACTGATTGGATTTTGTGCAGAAAAGTTTTACAGGCTTTTGGTTTATGAGTATATGCCTAATGGATCACTTGATAAATGGATTTTCTATAAAGATCATGATTTTATTATAGATTGGCAAACAAGACGTAGTATCATAAATGATATAGCGAAGGGACTGACATATTTACATGAGGATTGTAGACAAAAAGTTGTTCATTTGGATATCAAGCCTCAAAATGTACTCTTGGACGAGAATTTCAACGCTAAAGTATCAGATTTTGGATTAGCAAAACTTATCAATCGAGATCAGGTTGAAGTAGTTACAAGAATGAGAGGTACTCCTGGATATTTAGCGCCAGAATGGATGACCTCGGTTATTACCGAAAAAGTGGATGTCTTTAGCTTCGGTGTCGTGGTGCTTGAAATTGTATGTGGAAGAAGAAATTTAGACTACTCAAAAGATGAAGAAAACTTCCATTTAATTAGTCACTTACAAAGAAAAGTTACAGAAAATAAGCTAGCGGATATGGTAGATTGTCGTTGCACCAATATGCAGAGTCATATCGATGATGTTATAATGATTATTCATCTTGCAATGTGGTGTCTGCAGAGTGACAATAACAAGCGACCATTAATGTCTATGTTGTTAAAAGTATTAGATGGTTCTTTGGACGTGGAGGCTAATTTGGAATATAATTTCACGAACCCAACTCTTTATGCAACTAGAAATGCAAATATTGTCCAATCTTTTCAGCCAACACAGTCGAGTTTATCGGGACCAAGGTGA

Protein

Gene

>Asa6G07086.1
ATGCCATTTAATGCTCTTTCATGCAACTCATCCAAAACACATCAACTTTTATCGCTCTTCAATGTGTCTTATTTCACTTTCGATCGAGGAGCAGCAGCCAGGTACGATTACAATACAAGTGTTGAAGCTTGCAAGCAAGCATGTTTGGCAAACTGTTCTTGCAAAGCTGCATTTTTTCTATATTATAAGTTTGGTTTAGGACCTAATTATTGTTACTTGGAATACAAGTTGTACTCGTTGAACAGCAATCTACCAGATTATTTGGATGTAATCAATTCATCTGCATTTATCAAAGTGAAATCATTTCCTACTACAGATACGGCACCTAGAACAAACTCGAGCAACTCCGACTTTATAAGTGAAGTTAGGATTGTTATAGCTAGCGCTATCGTCCCATTTCTACTTGCTTTTATTCCTATCATTGCATGCGTCATAGCTTTTGTGAGGAGAAGATATAGTTATAGAGAAGTTGAGGATATTGATGAATTCGCTATGTTACCTAGACTACCTACAAGATTTGCTTTGAAGATCTTAGGGTTGCTACTGACGACTTCTTACGAAAACTTGGGGAAGGTGGATTCGGTTCTGTTTTCGGGGAAACACTAATCGATGGCACTAAGATAGCCGTTAAAAAATTGGATGGTGCTGGTCAAGGTAAAAAAGAATTTTTAGCCGAGGTTGAAACCATTGGTAGCATTCATCATGTACATTTGgtgagactgattggattttgtgCAGAAAAGTTTTACAGGCTTTTGGTTTATGAGTATATGCCTAATGGATCACttgataaatggattttctataaaGATCATGATTTTATTATAGATTGGCAAACAAGACGTAGTATCATAAATGATATAGCGAAGGGACTGACATATTTACATGAGGATTGTAGACAAAAAGTTGTTCATTTGGATATCAAGCCTCAAAATGTACTCTTGGACGAGAATTTCAACGCTAAAGTATCAGATtttggattagcaaaacttatcaaTCGAGATCAGGTTGAAGTAGTTACAAGAATGAGAGGTACTCCTGGATATTTAGCGCCAGAATGGATGACCTCGGTTATTACCGAAAAAGTGGATGTCTTTAGCTTCGGTGTCGTGGTGCTTGAAATTGTATGTGGAAGAAGAAATTTAGACTACTCAAAAGATGAAGAAAACTTCCATTTAATTAGTCACTTACAAAGAAAAGTTACAGAAAATAAGCTAGCGGATATGGTAGATTGTCGTTGCACCAATATGCAGAGTCATATCGATGATGTTATAATGATTATTCATCTTGCAATGTGGTGTCTGCAGAGTGACAATAACAAGCGACCATTAATGTCTATGTTGTTAAAAGTATTAGATGGTTCTTTGGACGTGGAGGCTAATTTGGAATATAATTTCACGAACCCAACTCTTTATGCAACTAGAAATGCAAATATTGTCCAATCTTTTCAGCCAACACAGTCGAGTTTATCGGGACCAAGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267268.1	1.0e-139	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Swissprot	Q8RWZ5.1	1.3e-86	S-domain-2 (SD2) receptor kinase 5
trEMBL	A0A5P1FV51	7.4e-140	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32300.1	40.20	1e-91	333	SD2-5	S-domain-2 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa6G07086	AT4G32300.1	500	253	9	9	469	329	821	40.20	1e-91	333
Asa6G07086	AT5G24080.1	291	146	5	150	437	120	408	48.11	5e-75	278
Asa6G07086	AT2G19130.1	419	221	8	39	433	367	772	38.42	1e-72	270

Ortholog group

Species	Genes
Allium cepa	g514606.t1
Allium fistulosum	AfisC6G00049
Allium sativum	Asa0G04617.1; Asa0G04619.1; Asa4G03169.1; Asa6G07086.1; Asa8G00374.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g23700.1; LOC_Os06g35850.1; LOC_Os06g35850.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08276.8	PAN_2	Domain	32	59	23.2	4.9e-05
PF00069.22	Pkinase	Domain	161	425	170.5	4.1e-50

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network