Detail information of Asa7G00839


Location
GeneChrStartEndStrand
Asa7G00839chr7250652551250653764-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252303.16.6e-34two-component response regulator-like APRR5
SwissprotQ96502.11.4e-04Zinc finger protein CONSTANS-LIKE 2
trEMBLA0A2H9ZYY69.0e-33Zinc finger protein CONSTANS-LIKE 4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G41380.148.773e-27 119CCT motif family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag132954.t1; g344875.t1; g36976.t1; g388049.t1; g44289.t1; g60588.t1; g85622.t1
Allium fistulosumAfisC1G00385; AfisC2G07880; AfisC2G08904; AfisC3G06008; AfisC4G04484; AfisC5G03878; AfisC6G01056; AfisC6G04531; AfisC7G01250; AfisC7G02260; AfisC7G03562; AfisC7G06114; AfisC8G03149; AfisC8G05459
Allium sativumAsa7G00839.1; Asa8G05268.1
Arabidopsis thalianaAT1G63820.1; AT5G41380.1
Oryza sativaLOC_Os01g61900.1; LOC_Os05g38990.1; LOC_Os12g01080.1; LOC_Os12g16160.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06203.11CCTMotif11415665.82.4e-18

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03539RPP1, RPP30; ribonuclease P/MRP protein subunit RPP1EC:3.1.26.5 RNA transportko03013
Ribosome biogenesis in eukaryotesko03008

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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