Detail information of Asa7G01187


Location
GeneChrStartEndStrand
Asa7G01187chr7332144438332160951-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020599046.15.0e-76PHD finger protein ALFIN-LIKE 8-like isoform X3
SwissprotQ7XUW3.24.0e-70PHD finger protein ALFIN-LIKE 4
trEMBLA0A5N5J4I91.2e-74PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G42790.154.171e-62 236AL3alfin-like 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag351755.t1
Allium fistulosumAfisC1G00332
Allium sativumAsa7G01187.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family13126163.51.5e-48
PF00628.26PHDDomain17422238.47.7e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0042393Fhistone binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11728BPTF, E(bx); nucleosome-remodeling factor subunit BPTFEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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