result

Gene information

Detail information of Asa7G01318

Location

Gene	Chr	Start	End	Strand
Asa7G01318	chr7	369584062	369585511	-

Sequences

CDS

>Asa7G01318.1
ATGGCGGATCAAACAAATGATTCCCAAACATGCAACTTCTTCCGCAAACCCTCTAAAACCTTAACAAACCTCCGCAAACGCAAACCTCAATCCTCTTCTTCCGACTCCGATACCGACTCCAAAGCGAAAACTGAACCCTCACACAAACCCGTTAAGAAAAACCCGAATCTCCACTTTACGTCCTCTTCCAAACCCTCTTCTAACAGATCCGAAGCTGAACCTGACAAAATGTTCCATTTTGAGTCCTCTTCCCGAATTCAAACCCAATCCGATTCTCGTGCCACAGCCACTCTCGAAACCGAAACCGATTTCTCCAACGATGCTCGTGCCATTCGTGAGCGTATTTTGAAGAAATCAAGTTCGGATCCTAAATCTGATGACAAAAAGCTTTATAAAGGGATTAATGCGTACACAGATTACAAAGCAGGGTTTAGAAGGGAACAGACTATAGCATCAGAGAAGGCTGGTGGAGCACATGGGCCATTAAGAGCGTCTGCGCACATTAGAACTACTGCTAGGTTTGATTACCAACCCGATATTTGTAAGGATTATAAGGAGACAGGGTATTGTGGATTTGGAGATGCATGTAAGTTTATGCATGATAGAGGAGACTATAAGAGTGGGTGGGTGTTGGAGAAGGAGTGGGAGGAGAAGGAAAAGGCAAGGAAGAGGGCAATTGCAATGGGAGAGGGTAAGGATAGTGATGATGAGGGTGGTAATGGTGATGTTGATAGCGACGACGAGAATGAACTGCCTTTTGCATGTTTTATTTGTAGGAAGTCATTCGAGGACCCAGTTGTTACTAAGTGCAAACATTATTTTTGCGAGCATTGTGCTTTGAAGTATCATTATGTTGTTAATTTGTCATATGAAAACAATACTCTAACCACTGAGTTAAGTAGGTTATTCATCATCACAGAAAAAGGACACATCGCCTTGGAGATTGTAGGTGGAATATTTTTTCTATGCAATACCAATCCATTAACAGAAAGCGGATTAAAGAACTCTCATGTGGGATCTGATCTTGACGAGAAATTCTCTATATGTTAA

Protein

Gene

>Asa7G01318.1
ATGGCGGATCAAACAAATGATTCCCAAACATGCAACTTCTTCCGCAAACCCTCTAAAACCTTAACAAACCTCCGCAAACGCAAACCTCAATCCTCTTCTTCCGACTCCGATACCGACTCCAAAGCGAAAACTGAACCCTCACACAAACCCGTTAAGAAAAACCCGAATCTCCACTTTACGTCCTCTTCCAAACCCTCTTCTAACAGATCCGAAGCTGAACCTGACAAAATGTTCCATTTTGAGTCCTCTTCCCGAATTCAAACCCAATCCGATTCTCGTGCCACAGCCACTCTCGAAACCGAAACCGATTTCTCCAACGATGCTCGTGCCATTCGTGAGCGTATTTTGAAGAAATCAAGTTCGGATCCTAAATCTGATGACAAAAAGCTTTATAAAGGGATTAATGCGTACACAGATTACAAAGCAGGGTTTAGAAGGGAACAGACTATAGCATCAGAGAAGGCTGGTGGAGCACATGGGCCATTAAGAGCGTCTGCGCACATTAGAACTACTGCTAGGTTTGATTACCAACCCGATATTTGTAAGGATTATAAGGAGACAGGGTATTGTGGATTTGGAGATGCATGTAAGTTTATGCATGATAGAGGAGACTATAAGAGTGGGTGGGTGTTGGAGAAGGAGTGGGAGGagaaggaaaaggcaaggaagagGGCAATTGCAATGGGAGAGGGTAAGGATAGTGATGATGAGGGTGGTAATGGTGATGTTGATAGCGACGACGAGAATGAACTGCCTTTTGCATGTTTTATTTGTAGGAAGTCATTCGAGGACCCAGTTGTTACTAAGTGCAAACATTATTTTTGCGAGCATTGTGCTTTGAAGGTATGTATTAATATACCTTTTTTTCAGTCCATATTGTGGTATCCATCATTATAAAATATACGTAGTTGTGCGTGTTATAAAGCATATTATAAAAGCAATATAATTTGTAGGGAACTTATGTAGGATGATTGTGTAaaaattagaaaggaaaaaaaaattagaaaggaTATATGAGATTAAAGATAACAACCTTCAAAAATCACTAATGAAAATTTCTAATGTCATTAATGTCTACGATGTGATCAGTCAAAACATTCAAGCTATAAACTCGTCTAGTGCTTATTAGTAGTGGTGTATGATAAGATTTCTTTAGTCGGATAGAAGGGGATTTAAGTAAAAGTATCGAGATTGGATGAATTGTGTTTTCCAGTATACTCACTATATCTGGATAAATTTTCAGTATCATTATGTTGTTAATTTGTCATATGAAAACAATACTCTAACCACTGAGTTAAGTAGGTTATTCATCATCACAGAAAAAGGACACATCGCCTTGGAGATTGTAGGTGGAATATTTTTTCTATGCAATACCAATCCATTAACAGAAAGCGGATTAAAGAACTCTCATGTGGGATCTGATCTTGACGAGAAATTCTCTATATGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026393222.1	1.3e-62	zinc finger CCCH domain-containing protein 1-like
Swissprot	Q8GX84.2	4.8e-62	Zinc finger CCCH domain-containing protein 1
trEMBL	A0A4Y7I8W2	9.3e-63	Zinc finger CCCH domain-containing protein 1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G01350.1	60.55	2e-94	342		Zinc finger (CCCH-type/C3HC4-type RING finger) family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G01318	AT1G01350.1	289	103	5	2	283	21	305	60.55	2e-94	342
Asa7G01318	AT5G06420.2	296	96	6	1	283	51	340	61.15	4e-94	341
Asa7G01318	AT5G06420.1	296	96	6	1	283	51	340	61.15	4e-94	341

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00642.21	zf-CCCH	Family	176	201	37.4	1.4e-09
PF00097.22	zf-C3HC4	Domain	255	282	22.5	6.8e-05

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0046872	F	metal ion binding
GO:0008270	F	zinc ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13127	RNF113A, CWC24; RING finger protein 113A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network