result

Gene information

Detail information of Asa7G01806

Location

Gene	Chr	Start	End	Strand
Asa7G01806	chr7	486989219	486992140	-

Sequences

CDS

Protein

Gene

>Asa7G01806.1
ATGGGGTGCGTATCGTCTAAGCACGTGGTCAAATCATCGCCTCCCTTCGAGTGTTCAAGCCATGCGGACGAATCTTCTAGAGGAATCTTAGACGGTTCCCTTTTCAACAAAGTCAATGTGGAGAGAACCGAGTCTGTAGAATCAGCCATAGCTAGCTCGAATCGCACAAGCACGACAAGCGCTCGGTTAGGCAATCTCTACCGATACATCGAAGGAGAACAAACTGCTGCTGGATGGCCCACGTGGCTTAGTTCTGTTGCAAGAGAGGCCGTTCATGGCATGGTTCCTCTTAAATCTGAATCCTTCGAGAGACTTGAAAAGGTAAATTTTGCTTATTTTATCCATCTGAAAAATATCCTTTACTGGGAAAAAAAAAAGTCTAATGATTGTAAAGAGCTGCAGGAACTTGTAGGTACAAACATAGCCTTTAtgacaatataaattttgtttgtatacacaattggttaaataaaaattctaacttgtACTTGAACAGTTAAAAATCCATGACATAATTGAAATGTCTATATTTTAACTGAAATACTATATGCCAACTGTGTACGAAGGTCGGACAAGGCACATATAGTACAGTGTTCAAAGCTCGTGAACTCGAGACAGGAAAACTATTTGCACTGAAGAAGGTGCGCTTCGACAATTTTGATCCAGAAAGCGTTAGATTTATGGCACGAGAAATAATGATTCTTCGCAGACTTAATCACCCAAACGTGATCAAACTCGAAGGGATTATAACGGCTCGCCTTTCTTGTAGTTTGTACCTTGTGTTTGAATATATGGAGCATGATCTTGCAGGACTTTCGTCTGCACCTGATATCAAATTCAGTGAATCTCAGGTATATGGCCAGAAGTAAATAAATTTTTGAAGGCTTTTATAAGCTGATCTTTCTGCGTTATGTGTAATGCAGGTGAAGTGTTACATGCATCAGTTCCTATCAGGGCTAGAGCATTGTCATTCTCATGGTATAATGCATCGCGATATCAAGTGTGCAAATCTTCTAGTAAACAATGAAGGAATACTGAAGATGGCTGATTTTGGGTTAGCAAATTTCAGTAATAGGCCTCCTGATAATCAGCCTCTGACGAGTCGTGTGGTGACTTTATGGTATCGACCACCCGAGCTTCTTTTAGGTTCAACTGACTATGAATCTTCCATAGATTTGTGGAGTGCAGGGTGTGTGTTTGCTGAACTTTTCATCGGGAAACCTATTTTACAAGGGCGGACCGAGGTATATTTCAAGAATTCCTACAAATTTGAACCATTTCtgttacatttttgctaattgtgTTCATGCTATCTAGGTGGAGCaaatacataaaatattcaaactttGTGGTTCTCCACCAGATGAATACTGGAAGAAGTCAAAGTTACCTCATGCTGCAGTGTTTAAACCCCATCAGCCATATGCAAACTCCCTTCGTAAGACATTTAACTACTTACCAGAAAGTACCTTCAGATTGTTACAGACATTTCTTGCACTCGAGCCTAGTAAACGTGGAACTGCCGCAAGCGCTCTATCATCTGAGGTAAGTTTTCGTTGTGCATGTATCTCTAGTCTCATGGTATTATACAAAATCTCACGCTTGTGTCTATTTCTTCTTCTGGCTTACAACAGTATTTCAAAACAAAACCTCATGCCTGTGAACCTTCGAATTTGCCTAGATACTCACCCCATAAGGAGATGGATGTGAAATACCATGAGGAAACACATAGGTGAGCTTGCTTATATTTCTTAACACAAGACAATGCTTCCTATACTTTAAAAGGTAAACATTCAATCCTACTTTTTATAGAAGAGCTTCACGTAGACATCGTGGGTCGGAAGTTTCGAATAAACCTGCAAGAATGCATAGAAGAGTTCAATCCATTAACCCACAAAAACTGAATACAAATGAAGAGGTTAATCTACTTCAGACTTTTCctaaaattcatttataatctaGACATAATCAACTAAAACCATAGAGCTACATCAGGAACCATGGCAAAATTCATCCAAAAGGCTGCTTATTGATTTGGATCCCGAGCCAACAATCAGTAATCAAGATGAAGAGCATAACTCGAAGCATGAACTGGAAAAAGGATATCCGTTTTCTGGGCCTTTTACTTCTTCTTTTGCTACAAGTGGAACTCAATGGCAAAGAAAACCACGGttaaaaaataatacaacacaggAGGATAAAAATGGGGAAAGCAAGGATTCTGGTGAAATGGAGAAAAAATCGAACAGATGGGGTCAGCCAGATTCAGGCCACCCAAACAATACTAACAACCACCATCGAGATTTGCCAAAGGAACATTATAGGAGAGATACTGTATCCTCGAAGCACCATCGCGTCATTTCGGTAATACTCTGCctgtttaattttgttttgacGAGTATAATTAACGAGAATAAAGAAACACTAGCCATTAAATCAATAATCTAATGCTTTTAATCAGCAGTGCAAGTTACGTTGGTATAGTGAATTGGCTAGAATGCACCATTGGTTAAAATATTAACCATGGATCATCGATCTAGAGACCAAAATCATAGAGTTTCCTTACTACAACAGCGAAGGGGGAAGACCATTGAATCTTGAATCTAATGTCctacaaaagataatttttgtctaCCATGATAATTTACCACATGAGAGAAACATATCCCTAATGATATTTTAGAACACTCAACATAAAGAAAACGGTAAATTCAGTAGAGAAAAATAGTTAATTCTTGTTGTTATTTATGTTTGTAGGATTTTCAAGGACATTCACAAAGGACTGATTTATCAGGGCATTTTCTATCTCAGCCAAACAAAGTTGATGAACTTCTAGAAAAACATGAACGACACATGCGTCAAGCTGTTCGCTCCATGAGCCATGGTCATCATGAAAGGGCTAAACATGGAGCTCTACATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275616.1	8.7e-186	probable serine/threonine-protein kinase At1g54610 isoform X1
Swissprot	F4ICB6.1	3.0e-143	Protein IMPAIRED IN BABA-INDUCED STERILITY 1
trEMBL	A0A5P1EFW9	6.3e-186	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G18670.1	69.57	6e-149	524	IBS1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G01806	AT1G18670.1	345	102	2	44	385	72	416	69.57	6e-149	524
Asa7G01806	AT1G74330.1	405	131	6	1	385	1	405	62.72	3e-148	522
Asa7G01806	AT1G74330.1	184	87	7	403	546	500	678	28.26	7e-06	49.3

Ortholog group

Species	Genes
Allium cepa	g117158.t1; g173661.t1
Allium fistulosum	AfisC1G02293; AfisC1G05633; AfisC2G00146; AfisC3G06621; AfisC4G07199; AfisC5G00247; AfisC5G04052; AfisC6G04320
Allium sativum	Asa5G05993.1; Asa7G00383.1; Asa7G01806.1
Arabidopsis thaliana	AT1G18670.1; AT1G74330.1; AT1G74330.2
Oryza sativa	LOC_Os07g40550.1; LOC_Os07g40550.2; LOC_Os07g40550.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	102	384	220.7	2e-65

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08819	CDK12_13; cyclin-dependent kinase 12/13	EC:2.7.11.22 2.7.11.23	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network