Detail information of Asa7G01821


Location
GeneChrStartEndStrand
Asa7G01821chr7492370720492401366+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020273817.11.3e-79upstream activation factor subunit spp27-like isoform X2
SwissprotQ05024.11.1e-14Protein TRI1
trEMBLA0A6I9Q9S53.0e-78upstream activation factor subunit spp27 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G49520.143.945e-68 254SWIB complex BAF60b domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag149569.t1
Allium fistulosumAfisC1G02333; AfisC4G04614
Allium sativumAsa7G01821.1; Asa7G01833.1
Arabidopsis thalianaAT1G49520.1; AT3G19080.1
Oryza sativaLOC_Os03g55570.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08766.8DEK_CDomain25361.06.7e-17
PF02201.15SWIBDomain104176106.83.4e-31
PF02201.15SWIBDomain21028392.21.2e-26

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15223UAF30, SPP27; upstream activation factor subunit UAF30EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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