result

Gene information

Detail information of Asa7G02189

Location

Gene	Chr	Start	End	Strand
Asa7G02189	chr7	586355244	586356787	-

Sequences

CDS

Protein

Gene

>Asa7G02189.1
ATGATGCTGGATCAAGACTGGGCTAATAATCCTGCAGCGGCTGCAGCGGCAATGATGCTCTTTGGAGAAGAAGCAAATACCAACCATGTCGATATCCAAAATAGTCATCATCATAACAATCAGATGTTCAACATGAATCATTATAATAACATGGATTATTTTCTACAAGCTCATGATTATCAACAAGGTGTTCCTACTGCTGCCTTATTCTCGAATGCTGAGTATGTTGGGTATCATCATCCATTAGTGCCTATGGCGTCGAGGATAGGATTGGATCTTGGTGTTAGGACATATTTTGCTACTGGCCCAGACGAGAATGAGAGAGGGAGGAGGAATAGTAATACAAATATGATGattggaaggaggaggaggagaaagatAGCAAGGTGTCAAGCAGAAGGATGTGGAAAGGATCTTACACTAGCAAAGCATTATCATAGGAGGCATAAGGTGTGTGAATACCATTCTAAGGCATCCATGGTGGTCGCTGCTGGCCTGTCTCAGAGATTTTGCCAGCAGTGTAGCAGGTAATATCTATGCATATTGTACCCTTCTTACTAGTCACAAGCAAGTACAGAGCAATACCATATTTAAAAACAACCTCCAGACTCTAGTTTGtaaaaaaccctagttttacataAGTTGTATACCTGCTTAATATTCTTAGAATCTTAATTGACatcaattttaaatttgattattttggttAGCATTGAGTTGACAACAGATCATACATATAAGCAAGCAGCCTTAGTTTGTCAATTTTTCCTGGCATTCTCTCATCTAATTAAtagattcattaacatttattaataaacataaaccATACGCATAAATAGCTATAATTAGCTTATTTCTTGGCATGAATGCTGATTTGAAAACTGAATCATCCCAAATAAAGATTGCTAGTGCATGAGCAAAAGAAAGGCAAAGTTAATTAGCAAATCTGAAGTGAGCTCGTTAACTTCAAAATGCAAGAACACTAACCATTGAAATTTATCATAGGCGTGGGCACACACATGTTATTATATGCATACTATAAATTATAAATGTTGCTTATTATGTATCTACTGGGACTTTAAGCTTAAAATTCCACTGCTAGgtttcatatattatcagaatttgatcAAGGCAAACGAAGCTGTAGAAAACGGTTAGCTGATCACAACCGACGCCGAAGGAAATCTCAAGACCTAACAACAACATCCACGTCAGTCTCCATAAATACCAATCCAATCAACAACAATAACGACAGTGCatcaacaacaaaaacaacaacggTGGGCAACAAATTGCAATTCAGCTCAGAAAATTTgcaaattgaaatgggaacaaaaTTATCAGAAGTGTGTTCTTCAGTTACAACTCATCATGATCCACAGGCACATTTGGATGTATTTCCAGCACCCCAAATGGAATTAGGGTTAACTGCATCATCATCTGCAGTCAGTACTACAAGTACTACAATGAAACAAAACAAATCCTGCAATCTGTCTAAACTTGGAGAATACTGTCAGCTGGGAAATCGATTTCCTGCTAGCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020085290.1	3.2e-39	squamosa promoter-binding-like protein 8
Swissprot	Q8GXL3.2	1.0e-34	Squamosa promoter-binding-like protein 8
trEMBL	A0A8K0N4P1	1.3e-39	Squamosa promoter-binding-like protein 8

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G02065.1	61.27	1e-40	164	SPL8	squamosa promoter binding protein-like 8

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G02189	AT1G02065.1	142	52	3	86	225	144	284	61.27	1e-40	164
Asa7G02189	AT1G27370.4	164	65	4	59	207	104	253	42.68	4e-30	128
Asa7G02189	AT1G27370.3	164	65	4	59	207	104	253	42.68	4e-30	128

Ortholog group

Species	Genes
Allium cepa	g227954.t1
Allium fistulosum	AfisC1G02193
Allium sativum	Asa7G02189.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03110.11	SBP	Domain	130	203	104.0	3.2e-30

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0005634	C	nucleus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13415	BRI1; protein brassinosteroid insensitive 1	EC:2.7.10.1 2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network