result

Gene information

Detail information of Asa7G02404

Location

Gene	Chr	Start	End	Strand
Asa7G02404	chr7	648924678	648926015	+

Sequences

CDS

>Asa7G02404.1
ATGTCTCTACCTCCTGGATTTCGATTTCACCCTACTGATGATGAATTAGTAAATTATTATCTTAAAAGGAAAGTGGATGGGTTGCCCATAGAGCTGGAAGTGATCCCGGCCATTGATTTATACAAGTCTGATCCTTGGGAGTTGCCAGAAAAATCATTTCTACCAAAAAGAGATATGGAGTGGTTTTTCTTCTGTCCAAGAGACAAGAAGTACCCAAATGGATCAAGAACTAACAGGGCCACCACATCAGGATACTGGAAAGCTACAGGTAAAGACCGCAAAGTCTTTTGCGAATCTTCAGTTCAAGGACTGAGGAAAACCCTAGTGTTCTACCTTGGAAGAGCACCTGGTGGAGAAAGAACCGACTGGGTCATGCACGAGTATCGTCTTTGCGAAGATCTCTCTCAGCCTGTTCCTCATTTTTTGGGAGCATTTGCATTGTGCCGGGTGATGAAGAGAAATGAGCATGGTCTCAAAGTAGGGGAACCACAAGGAGATTCTAAAGGAAAAAGAAGCTTCTCTCCTATGTCCAGTGAATTTAGCCCTAGAAGAAAGTATGATAAAGGGATGAATAGCATAGGAGAATGCTCCACTGGATCAAAACTTTTTGAAATCAACAATAATGCATTGGTAACTTCTCAAAGTGGGATAATGGGAATGAATATGCAACCAGTTAACACAGCAGAAACACATCAGAGCTCAGAGAATTTTGTGTCCGAGCCTGCTGCTCCTTATCAGCCCGATCACCTCAGTTCAGCAGAAGCATGCCAGTCGGATAGCATTTCGCGAGTAACATCTTATGCAAGCTTAACCGATGAAACTAACTATAGTGCAGAAGACTTCTCTACTCAAGGAATCTTTTCAAATACTCCTAGTGGTACGGAAGTTGACAACAATATGAATATGTACTTCAATAGTGAAGCTTTGGGACTTCAGGGTTTCGAATGGGACATGTCAGAAGCTTACATTAACACAGGTTCACTTGGTGTTGAAGCATATGACATGCCATGGTATTCTTCAACATTATGCAGACAGGCAAGTGATGTCGATGAACTGAATTTGTGGTTGCAAGATGAAAACTTGACTGTTATGTGA

Protein

Gene

>Asa7G02404.1
ATGTCTCTACCTCCTGGATTTCGATTTCACCCTACTGATGATGAATTAGTAAATTATTATCTTAAAAGGAAAGTGGATGGGTTGCCCATAGAGCTGGAAGTGATCCCGGCCATTGATTTATACAAGTCTGATCCTTGGGAGTTGCCAGGTAAAATAAATGCATGTATGTTTCATAATATCAATTCCATTGTTCTTTTTATCAttgtaaatctttttaaaaatgcagaaaaatcaTTTCTACCAAAAAGAGATATGGAGTGGTTTTTCTTCTGTCCAAGAGACAAGAAGTACCCAAATGGATCAAGAACTAACAGGGCCACCACATCAGGATACTGGAAAGCTACAGGTAAAGACCGCAAAGTCTTTTGCGAATCTTCAGTTCAAGGACTGAGGAAAACCCTAGTGTTCTACCTTGGAAGAGCACCTGGTGGAGAAAGAACCGACTGGGTCATGCACGAGTATCGTCTTTGCGAAGATCTCTCTCAGCCTGTTCCTCATTTTTTGGTCAGTCTGCcctaatatatcattttattttacattgcgCTAGCACCTTTACTTTGATATTTCATACTTTGATCAGAACAAATACCTTTCAAGGGATGACTCATGACTGTTTTCAAAGGTTGCTATTGTTGCAGTATTGATAAATTACTATGTATGTATAAATAGGGAGCATTTGCATTGTGCCGGGTGATGAAGAGAAATGAGCATGGTCTCAAAGTAGGGGAACCACAAGGAGATTCTAAAGGAAAAAGAAGCTTCTCTCCTATGTCCAGTGAATTTAGCCCTAGAAGAAAGTATGATAAAGGGATGAATAGCATAGGAGAATGCTCCACTGGATCAAAACTTTTTGAAATCAACAATAATGCATTGGTAACTTCTCAAAGTGGGATAATGGGAATGAATATGCAACCAGTTAACACAGCAGAAACACATCAGAGCTCAGAGAATTTTGTGTCCGAGCCTGCTGCTCCTTATCAGCCCGATCACCTCAGTTCAGCAGAAGCATGCCAGTCGGATAGCATTTCGCGAGtaacatcttatgcaagcttaACCGATGAAACTAACTATAGTGCAGAAGACTTCTCTACTCAAGGAATCTTTTCAAATACTCCTAGTGGTACGGAAGTTGACAACAATATGAATATGTACTTCAATAGTGAAGCTTTGGGACTTCAGGGTTTCGAATGGGACATGTCAGAAGCTTACATTAACACAGGTTCACTTGGTGTTGAAGCATATGACATGCCATGGTATTCTTCAACATTATGCAGACAGGCAAGTGATGTCGATGAACTGAATTTGTGGTTGCAAGATGAAAACTTGACTGTTATGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259502.1	1.7e-113	NAC domain-containing protein 86-like
Swissprot	O49697.1	1.2e-68	NAC domain-containing protein 71
trEMBL	A0A5P1F1I3	1.2e-113	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G17980.1	75.80	1e-68	256	anac071;NAC071	NAC domain containing protein 71

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G02404	AT4G17980.1	157	34	2	3	155	6	162	75.80	1e-68	256
Asa7G02404	AT1G32510.1	195	63	2	3	189	6	200	63.59	7e-65	244
Asa7G02404	AT5G46590.1	155	41	2	3	155	6	160	72.26	3e-64	242

Ortholog group

Species	Genes
Allium cepa
Allium fistulosum	AfisC1G02602
Allium sativum	Asa7G02404.1
Arabidopsis thaliana
Oryza sativa	LOC_Os10g42130.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	4	130	101.3	3.5e-29

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12581	CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8	EC:-	RNA degradation	ko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network