Detail information of Asa7G02549


Location
GeneChrStartEndStrand
Asa7G02549chr7697404624697418889-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAGV31156.11.6e-83A-class MADS-box protein
SwissprotQ6E6S7.14.5e-43APETALA1-like protein
trEMBLT2CBN11.1e-83A-class MADS-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G60910.152.923e-62 234AGL8;FULAGAMOUS-like 8

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag187406.t1
Allium fistulosumAfisC1G07103
Allium sativumAsa7G02549.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105792.85.7e-27
PF01486.14K-boxFamily8417287.54.6e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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