Detail information of Asa7G02730


Location
GeneChrStartEndStrand
Asa7G02730chr7746554135746562099-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020261860.16.5e-95zinc finger CCCH domain-containing protein ZFN-like isoform X1
SwissprotQ9SWF9.12.0e-72Zinc finger CCCH domain-containing protein ZFN-like
trEMBLA0A5P1F3N54.7e-95Zinc finger CCCH domain-containing protein ZFN-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G02830.155.698e-124 440PNT1;ZFN1zinc finger protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag515243.t1
Allium fistulosumAfisC1G06846
Allium sativumAsa7G02730.1
Arabidopsis thalianaAT3G02830.1
Oryza sativaLOC_Os01g68860.1; LOC_Os01g68860.2; LOC_Os01g68860.3; LOC_Os11g28270.1; LOC_Os11g28270.2; LOC_Os11g28270.3; LOC_Os12g21700.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily386333.32.9e-08
PF00642.21zf-CCCHFamily8310740.02.3e-10
PF00642.21zf-CCCHFamily13015433.13.3e-08
PF00642.21zf-CCCHFamily27830335.94.3e-09
PF00642.21zf-CCCHFamily32434939.53.1e-10

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03260EIF4G; translation initiation factor 4GEC:- RNA transportko03013

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.