result

Gene information

Detail information of Asa7G02982

Location

Gene	Chr	Start	End	Strand
Asa7G02982	chr7	812734273	812734743	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010517014.1	8.2e-09	PREDICTED: zinc finger protein ZAT11-like
Swissprot	Q9SLD4.1	2.3e-08	Zinc finger protein ZAT11
trEMBL	A0A5P1EST6	2.2e-08	C2H2-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G37430.1	44.35	5e-21	97.1	ZAT11	C2H2 and C2HC zinc fingers superfamily protein

>>>Show top 3 blast result

Ortholog group

Species	Genes
Allium cepa	g134102.t1; g342744.t1; g433211.t1; g494350.t1; g494354.t1; g494363.t1; g514836.t1
Allium fistulosum	AfisC1G06524; AfisC1G06527; AfisC1G06528; AfisC1G06529; AfisC1G06530; AfisC5G04403
Allium sativum	Asa0G04218.1; Asa0G04814.1; Asa4G04225.1; Asa7G02954.1; Asa7G02977.1; Asa7G02979.1; Asa7G02980.1; Asa7G02981.1; Asa7G02982.1; Asa7G02983.1; Asa7G02984.1; Asa7G02985.1; Asa7G02989.1; Asa7G02990.1; Asa7G02999.1
Arabidopsis thaliana	AT2G28710.1; AT3G53600.1; AT5G59820.1
Oryza sativa	LOC_Os03g17150.1; LOC_Os05g02390.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13912.3	zf-C2H2_6	Domain	55	80	39.8	2.6e-10
PF13912.3	zf-C2H2_6	Domain	100	125	34.2	1.5e-08

Gene Ontology

Accession	Ontology	Name
GO:0046872	F	metal ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14841	NSA1, WDR74; ribosome biogenesis protein NSA1	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network