result

Gene information

Detail information of Asa7G03114

Location

Gene	Chr	Start	End	Strand
Asa7G03114	chr7	853774087	853776495	+

Sequences

CDS

Protein

Gene

>Asa7G03114.1
ATGATGGTagaggaggaaatggaaatgggatTCGAAGCGACTGAACTTCGATTAGGACTGCCTAGCAGCAGAGAGGAATCAGAAGTGAAAAGTTCAAGCAAAAGAGGTTTTTTAGAGAccatggatttgaatttgaagcttGAAACCTCTAGTAACAACAATGAGAATTCAACAAGGTTGCCCCCAGGATCAGTCAATGAAGGTATGAGTCGTGTTGCAAGCCAGAAAAGTCTTCAGATTGATTCTAGTATTGATGATCCTGAAGAACCTTCTGCTCTCAAGTGAGTCATTTTTTTAATAACTAACTTAAGTTTGCAAAACCGGGATTCTTATTCTGTATCATTTATTCCAAATTTTCCTTGGATTTGGGTAGATTCATGGTTTAAGAAGCTTTAGAGTTCTAACTTAAATTTTGTCGATATGAATATATTTGCAACTTTGATAAGTTTAAGGATCTCGCATAAAAGGAAAGCTGTCTAAATATAGTTCCATATACTACTGTGAATGAAATTGTTAcactgtaaattgaaatgtattctTTATATATGAGAGaacatgcaaattgataaggtccACTATTTACTATGTCTATGTGCATGCATATAGTGCCATTTAGATATGAAAATtatgaacatttttgtatatttcaTTATAATCATTGTTACAATGTACAAGTCCATTTACATAGCTATTATTTACATGATATTAGGTCGCAAGTAGTGGGATGGCCACCAGTTCGATCATATAGGAAGAGTTTAATGTCTGTACAATCTGGAAAAGGAAGTAAAGAAGAATCCAGTAGAGCTCAAGCAGCTTTTGTGAAAGTGAGCATGGACGGTGCTCCATACTTAAGGAAAGTTGATCTCAAAGTGTACCATAGCTATCAAGAACTTTACATGTCACTCGAGAAGATGTTCAGTTCATCAACAATTCGTAAGAACAACTAACTATCTTTTGACACATATCGTATGAAATTTGATAGTTTCAGCATAAATTTTGTATACCTTGTATTTTACCTTCTAACTAAACATAATATAACATGGTTTTAGAAACGGTGTTGGAAGGTAAATTGTTGATTTAAATCTGTAATCAAAATTAGATTCAAATCGTGAGCTTGCATGCTAAATAAAAGCTTTGCTCTGTTAGGTTCAGAAATAAGATTTATGTATGTAAAATTTTGATTCCTCTTTGATGTTTGAGAACCTATGTCTAAACTTAAACTTAGATCGTTCCTCTTGTAAACTTATTctcaaggaagaagaaaaaaaaaaaaaacgtttcttctatttttatctttattttgatcagaaaaaaacaacaaaatttatatggaACAATTAAATAAGTATCATGATATTTTTGTCCTAGCATAGATTGGGAAAACAAATTTCAACTGTGTTTTACAAACTATTTGGGTTAACTAAAAGAAATATCATAGCATAAACCTCTTTGTTAAACACATACAACTATATTATATCAGCTATTATAAGAAGAATAGATTTATGATACATAAAATAACCAaagatgttgatgtgaaataaatTTGGAAGCTACCAAGAAAAGGATAGAAAGCATGGAGAACTTAATTAATTTGGACATGGAACAATTGGTAGGGTACATGAATTAATACGGCGCCTTTTAATACACAAACAATCATATCTATTAACATGTGATTGCCAGAGTATGCATGGTTTCTGAAAATTACAAGTTCTGTAGGCTTACATGCATCTACATAAGATACTAACTAGCCAGGTGTGTTTTATTTTACTGCCTACTCAATCAAGatataatagtagtagtagtagcaGTAATGTCATTGTAacatttaattattagtttaaatgaTTCTCTCCATTAAATTTGTTTAAACGAATGGTACATATGCTGTTGGTTGTTAGATAAGATACGtatatcttcaaaaaaaaatcattctttaaggtacaaattattcccCATAGATTAAAGACAGTGTTTATTGTACTGACTCACAACTAGCCAAGATTCTTAATGCCGGTGGTGGTTGCAATAATTTTGACCAAATTTAATGTGTAATGTGCTTGATAGAATAAACATTTAGTTATGTAGATATGCAAAATCTATTTTGATACTTATTTAGttcaataattttttttcaatataggAAACTGTGGGTCGCAAGATCTGCTGAATGGTTCAGAGTATGTACCAACTTATGAAGATAAAGATGGGGATTGGATGCTTGTAGGTGATGTTCCCTGGGAGTAAGTTCTTGATTTCATTCTTTACTTTAGTTACTACTTAAAAGTTCATATAACTTAATTCTCTTCGGATTTATACATATATGTCTGTAATGTATTTAAATTCACAGGATGTTTGTAGAATCCTGCAAGCGTTTAAGGATCATGAAAGGTTCAGAAGCAGTAGGTTTGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276523.1	2.7e-66	auxin-responsive protein IAA30-like
Swissprot	P0C132.1	5.2e-54	Indoleacetic acid-induced protein 30
trEMBL	A0A5P1EGF1	2.0e-66	Auxin-responsive protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G23050.1	55.00	5e-58	220	AXR2;IAA7	indole-3-acetic acid 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G03114	AT3G23050.1	240	67	8	9	222	6	230	55.00	5e-58	220
Asa7G03114	AT4G14550.1	233	72	8	9	222	1	216	53.65	1e-55	213
Asa7G03114	AT3G04730.1	244	72	6	9	222	2	224	49.59	2e-55	212

Ortholog group

Species	Genes
Allium cepa	g191266.t1
Allium fistulosum	AfisC1G02439
Allium sativum	Asa7G03114.1
Arabidopsis thaliana	AT1G04250.1; AT3G04730.1; AT3G23050.1; AT3G23050.2; AT4G14550.1
Oryza sativa	LOC_Os03g43400.1; LOC_Os12g40890.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02309.13	AUX_IAA	Family	14	222	237.0	2.4e-70

Gene Ontology

Accession	Ontology	Name
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14484	IAA; auxin-responsive protein IAA	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network