Detail information of Asa7G03185


Location
GeneChrStartEndStrand
Asa7G03185chr7874194846874199111-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020277367.16.7e-62MADS-box protein SOC1-like
SwissprotO82743.12.1e-52Agamous-like MADS-box protein AGL19
trEMBLA0A8B8ZBJ89.8e-55MADS-box protein SOC1-like isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G22950.156.544e-56 214AGL19;GL19AGAMOUS-like 19

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag173561.t1; g534887.t1
Allium fistulosumAfisC1G06297
Allium sativumAsa7G03185.1
Arabidopsis thalianaAT4G11880.1; AT4G22950.1; AT5G62165.1; AT5G62165.2; AT5G62165.3
Oryza sativaLOC_Os10g39130.1; LOC_Os10g39130.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105795.01.2e-27
PF01486.14K-boxFamily8316982.51.6e-23

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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