result

Gene information

Detail information of Asa7G03313

Location

Gene	Chr	Start	End	Strand
Asa7G03313	chr7	898820185	898825619	-

Sequences

CDS

>Asa7G03313.1
GGTACTTGACAGTTTTTTTCTCCCTAATTCCAGATTGGCACATATGCAATAAATGCCAAAAATATTCTACGTGTAAAAGCTGCATAAAAGAAGCAGAATTCTTAATAGTTAGAGGAGTAAACGGGTTCTGCAAGAGATGCATAGATATTGTGATTTTGGTTGAGACAGACAACGGTGCCGACTACGTGGATGAAGAGCTATTTCTGTTCAGGGACTATTGGTTAGAACTGAATAAAAAATTATGCCTAACAACTGATGAAATAATAAGTGCTAGCAATCGCCTCAACAAACCCAATGTAACCTTTAACACAATAAAGACTGGCAAAACCAGGTTGGAACTATCTGATAATAACGTGGGCAATGCTAATGAAGGACGAGTCAGAAGTTCACGACGTTTGAAGCATAAAAAATCCTCATCATATGTAACAAAGAAGCTGAAAGTACGGGCGAAAAATTCAGAACAGAGAAACATCAAAAATGAATGGGCTTCAAAAGAGCTTCTAGATTTTGTGGCACATATGACAAATGGTGATACATCAGAAAGATCATGTTTTGATGTTCAAGGTCTTCTACTCGAATATATAAAACAGAATAATCTGTATGACCAGTTTAAGAAAAATCAAATTGTTTGTGATGCAAGGCTATTAGATCTTTTTGGAAAATCACATGTTGGGCATTTGGAAATGCCAAAACTTTTAGAACCTCATTTCCTTGAAAGCAAAGCCTTTTCACATGCAACAAATGAAAATCAAAGAAGTGTTGTTGATCCGGCACTTAGTCTGGCTGATGACGAACAAACTAGTGATGCTTTAGCAAAGCTTCCATCGATTAGAAGTACAAAATCATGTAATCACACAGAAGAAAAAAGACTTGCTAGCAGTGTTGAGGACTATGCAGCTATAGACGTCCATAACGTTAGCAAGATGTATTTGACCCACCATCTGATTGAGCGTTTACTCGGTGACACCGACTTGTTTGTTGAATGTGTTATCGGAGCATTCGTTAGAATAAAGATATCTGCTCCCACTTCAAACACTGACATGTATCGACTTGTGCAAGTTGTTGGGTTAGGCAAGGCTGCCTGTTTGTATGATTTGGGTAGCAAGAAGACAGATTTAACATTGGAGGTATCAAATTTGGGGAGGAAAGAGTTCCTAACTATTGATCTCATCTCATCCCACGAGTTCACTGAGGAGGAATGCAAACGCTTGAGGCAAAGCATAAAATGCGGAGTGATTGATAGAATCACAGTGGCTCAAGCTCAAGAGAAAGCTAACGCTCTCCATCCCGTAAAAAAAAAACGATTAGAAAGATCTGTAATTCATGTTGACCCCAACATGCGTCCCGATCATGAGTCTCCTGATGAAGATGAAGAAGATCGAGGGTTCCAAAATCGAGATAACACGAATATGTGCAAAGCAAAATTGAATGATTCAACGAAAAAGGCATCAACGTCGAAGTCGGATGCCATCAGCAACAACGAGACCGTACCACAAAAAGAAACTGAACAGCTTTCTAAAGTTTTGGTCGAAACCAATACATATGAAATACAAAAGATTTGGCACTATCAGGATCCTCAAGGTAAAATTCATGGTCCATTTTCACTGAAGAGACTAAGAAAATGGAAGAAAGAGAATTATTTTCCAGTCACTATGAGAGTATGGAAAACATCAGAAAGACAGGAAAACTCAGTTTTGCTGACTGATGTTCTAGAAGGGAAGACAAGCACTGAATCGCGGCCTGCGCGCAGCAATTTACCCACGAGCAATGCAGCAGCTGTTTTGGTAGTTTCTGGAGTAACCAACTCCCTCGCTTTTGGTTATCCAGTTATGCAACCTCATCAGCATAAGCCTGCGCAGAGAATGCACGATCAGCAAAGTTCAGAAAACCCCATTGGTCGATGGTATGGGAGTTCGAATCATAAAAACAGACGAAATAGGAGGTTTCAACCCTATAGAAGGAATCAGAACATGACTTATAGTGCAGGAGCGCAGCAGACGAAAATGGGTTACCGAGGGTCACAGCAGATTGCCTTGAACACGAGCAGGGGAGGCACGGCACCACCTCCACCTCCACCTCCACCTCCACCACCACCTCCACCTCCACCTCCACCACCACCACCACCACCGCCGCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCAGCACAACTTTCAGTCCAAATTTTTCCGACAAACATGAAGTGGGGCCGCCCACCAGCTCCTTCAGGTTTGGAAATGCCATCGCCCCTGCCACCACCAGTACACAAACCCCCGCCGCCGCCACTTCAACCACAACCACACAAACCTCGGCCACGGCCACTTCAACCACCACCACCACCGGTAGGGCCACCACTTCAAGGAACACAGATGCAGCCCAATCCAGCAACCAGACTGCCGCGTCGCCCTCGTCAGCCCAATAGATTACAACGAAATGCAAACGTTTATCCCGCGAATGCTGAGCTAAATCATCCTTCGTGTAGTCAACTTTGCTGGCACTATATGAACGGGTACTGTAAGAGGGGGCGAGGTTGCGAGTTTGTGCACCCTAGTACACCCTGA

Protein

Gene

>Asa7G03313.1
GGTACTTGACAGTTTTTTTCTCCCTAATTCCAGATTGGCACATATGCAATAAATGCCAAAAGTATGCACATTATTTGTGCTATACCTGCAGATATTCTACGTGTAAAAGCTGCATAAAAGAAGCAGAATTCTTAATAGTTAGAGGAGTAAACGGGTTCTGCAAGAGATGCATAGATATTGTGATTTTGGTTGAGACAGACAACGGTGCCGACTACGTGGTATCCGCTTATGCTTATTTATTTCATGTTCAACTTCAATGTTTTTGCTTGAAGATCTTTTCTTAAAAACATATGCAACCACGTGTTTGCTCACGTGCGCACATGTGTGCATATGCGCGCGCAgcgcacacacacgcgcgcacacacacacacacacacacacacatatatatatatatatatgtatatatatatatatgtatgtatatatatatacatatatatatatatatatatatatatatatatatatatatgtatgtatgttacaGGTTATCTCTATTTGGTAGCATTTCATTTTAAgctattcatttataattaaataagttaatgaggAGATAGAGAGCAAGTGAGAAGAGAGAAAAATGGTAATGTGTAGCCTATAGGGATGTGTTTGAGGTGGGCTTGATcctacaaatatacatacatacaaacacatgaatatacatacgCCCCACTTTTGCTACATTCCATTTTACTCCCCTTCGGTTTTTGATACCATGTTATTCTATACTCAATGAAACTTTAGGGTATGCAACTGTTAAGACTTTTTACTTTAACTTCAATTCAAAGTATTGCTTTGAAATTTCTGGAATTTGGAGTTAAACCAATATTTTGTTTGGTTGAACTTGATGCATACATCCATACATACGCATGTGTATGCTCAAAGAACAATGGGTTTCTACAgcttttaaccattaaaataataaattgtaatAGCCGTTGTATCAAGAGCACCACCccaccatcccccccccccccccccccccaaaaaaaagaaCATCTACAAAATGCCTCTTACATCAATTTGACTTTCGGTACTACATGTGTGATGCAGTTGCATTGCATGTATAGTTGAGTATTActaattatttgtggctaagatctTCAATTTGTTTCTTGTTGGCAGGATGAAGAGCTATTTCTGTTCAGGGACTATTGGTTAGAactgaataaaaaattatgcctaACAACTGATGAAATAATAAGTGCTAGCAATCGCCTCAACAAACCCAATGTAACCTTTAACACAATAAAGACTGGCAAAACCAGGTTGGAACTATCTGATAATAACGTGGGCAATGCTAATGAAGGACGAGTCAGAAGTTCACGACGTTTGAAGCATAAAAAATCCTCATCATATGTAACAAAGAAGCTGAAAGTACGGGCGAAAAATTCAGAACAGAGAAACATCAAAAATGAATGGGCTTCAAAAGAGCTTCTAGATTTTGTGGCACATATGACAAATGGTGATACATCAGAAAGATCATGTTTTGATGTTCAAGGTCTTCTACTCGAATATATAAAACAGAATAATCTGTATGACcagtttaagaaaaatcaaattgttTGTGATGCAAGGCTATTAGATCTTTTTGGAAAATCACATGTTGGGCATTTGGAAATGCCAAAACTTTTAGAACCTCATTTCCTTGAAAGCAAAGCCTTTTCACATGCAACAAATGAAAATCAAAGAAGTGTTGTTGATCCGGCACTTAGTCTGGCTGATGACGAACAAACTAGTGATGCTTTAGCAAAGCTTCCATCGATTAGAAGTACAAAATCATGTAATCACACAGAAGAAAAAAGACTTGCTAGCAGTGTTGAGGACTATGCAGCTATAGACGTCCATAACGTTAGCAAGATGTATTTGACCCACCATCTGATTGAGCGTTTACTCGGTGACACCGACTTGTTTGTTGAATGTGTTATCGGAGCATTCGTTAGAATAaagatatctgctcccacttcaaACACTGACATGTATCGACTTGTGCAAGTTGTTGGTAGGTTTTCAGATATAAATCATTGCTCACAgtaatatttttagttttcttgcttaaatttattaattatcatcTTTTTCTCTGTAGGGTTAGGCAAGGCTGCCTGTTTGTATGATTTGGGTAGCAAGAAGACAGATTTAACATTGGAGGTATCAAATTTGGGGAGGAAAGAGTTCCTAACTATTGATCTCATCTCATCCCACGAGTTCACTGAGGTAAAATTTTGTTTGTGTGCGTGCAGGCGCGTGTGAGCGTGcaaagggtgggggggggggggggtgcgcgcatgtgcatgcatatatatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgagtgcgcGCGCGCGAGGGCGGGCGTGCTAACTTAAGTTTATTATCTTAGGGGGCGCGCTAGCTTAAGTACATTATCTTAGGGCCATGCTATCCTCATACTCTTTCATATATATCAGCAATACATCCTActtattgatttaaaataagaggctattttacttatttaatgcatttttttcaaaaatcggTAGATAGGAAACAACATACCGATTGTACCCTCCTTGGGATGTTTGAGATTAACGGCTTAACATCGGCGTATAGTTGAACATTCTTCACAGGTGATTCAACTTATGATAAGTGTTTTGATCATATGACTGGTTGCGTTCCATATTTATAGCGTAAGGAGGAAATATGAcaggtttaatcttttagtttataaattcatacaAGAAGACACAACAAACATGTAACTTGTATTGGTAAAATCACATATGATTTACCTTTATACCTGTTCTTTTTACTTCTACGCTATTATTTTAAACCTTTCGCTATAGGTGAATCTGACCAAAAATGATTTATTGTCCACTTCAAAATCTAAAAGTAAGCCAATTATATACCATGATTTAATTATCCTAATTTGGTTCAAATTACCTTCTCTTCCATGAAAAATGAAAGTGgacctttcttttttctttttgggtttTCTTTTAGGTAAAGTAGGAAATGAGTCAATAGTTACATGTATATATGATTCTTTTTTTGTCCATATTTACATGTACATATAAAATTTCTTCAATAGTTGCATGCGTACATCAAATTTCACTTCCCAAATTGCAAATGTTCCATTTTTGTTATCTCCTAAATCATTAGAGAAAtgagatattgttatatttttatatatcggaTCCTGTTGATGCCAATATTCATATAACTTGGTTATTTGATAGTTTCAGATTTTCGAAATTTCCATTATCTTACTAGTGATATTTTGAAATCCAGGAGGAATGCAAACGCTTGAGGCAAAGCATAAAATGCGGAGTGATTGATAGAATCACAGTGGTAAAATTAACTACTCGAAACATCTATTTGGTCGAAATCTTCCGAGGTATATAATGTATCATTTTACCTGTACCAGGCTCAAGCTCAAGAGAAAGCTAACGCTCTCCATCCCGTAAAAGTGAATGATGTGAGCATATAAGTTTCGAATACATTTTAGTATTTGTTTTAAGTAGTAGATTGTTGGCTGTAGTTATTCCTTCCTAACACATGTATGTTATTTACAGTGGATAGAAAGCGAGAAAAGGCGTTTGATGAATATCCGCAACCGTGCTAGTGAGTATGGTCTGGAAAAAGAATATCCTTTATATTGATAAAagaatattagttttttttttttttaaagaaaaaacgaTTAGAAAGATCtggtaaaaaaaaattagtacattTTATATTCTATAAAAACCATGGGcatatgtttttaaatttcagtttcaccTTTTATGCCAGAAACTCATTTATGTTGGACACAAACTGTGGGTTGTGTTTACGCAAATTTCCTCTTGATATATTTTCACAAACAATCTACAAGTATTCGGCTTTCCAACATCGTATGATCACAGCTAACTTGCATGTGTAACTGTAACATGAATTATCATATTTTACAAAAGATGCCAATGCTATTTCATAGTTTTATTTAACCTTAACTTGTTTCTACGTATAAACTATGCATACAAAAACTTGAGCTTCTGAACAAGCCTGAGGAGCGTTTCAGATTACTGAATAATCTTCCAGTAATTCATGTTGACCCCAACATGCGTCCCGATCATGAGTCTCctgatgaagatgaagaagatcgAGGGTTCCAAAATCGAGGTACTTCCTGTTTCCTAACCATCACTATTTTTATAATTGGTACACCACCAAGTCCAAGTGTACCGACTGCAAATTACCTATCTGATTTATATGCAGATAACACGAATATGTGCAAAGCAAAATTGAATGATTCAACGAAAAAGGCATCAACGTCGAAGTCGGATGCCATCAGCAACAACGAGACCGTACCACAAAAAGAAACTGAACAGCTTTCTAAAGTTTTGGTCGAAACCAATACATATGAAATACAAAAGATTTGGCACTATCAGGATCCTCAAGGTAAAATTCATGGTCCATTTTCACTGAAGAGACTAAGAAAATGGAAGAAagagaattattttccagtcactaTGAGAGTATGGAAAACATCAGAAAGACAGGAAAACTCAGTTTTGCTGACTGATGTTCTAGAAGGGAAGACAAGCACTGAATCGCGGCCTGCGCGCAGCAATTTACCCACGAGCAATGCAGCAGCTGTTTTGGTAGTTTCTGGAGTAACCAACTCCCTCGCTTTTGGTTATCCAGTTATGCAACCTCATCAGCATAAGCCTGCGCAGAGAATGCACGATCAGCAAAGTTCAGAAAACCCCATTGGTCGATGGTATGGGAGTTCGAATCATAAAAACAGACGAAATAGGAGGTTTCAACCCTATAGAAGGAATCAGAACATGACTTATAGTGCAGGAGCGCAGCAGACGAAAATGGGTTACCGAGGGTCACAGCAGATTGCCTTGAACACGAGCAGGGGAGGCACGgcaccacctccacctccacctccacctccaccaccacctccacctccacctccaccaccaccaccaccaccgccgccgccgcctcctcctcctcctcctcctcctcctccaccagcaCAACTTTCAGTCCAAATTTTTCCGACAAACATGAAGTGGGGCCGCCCACCAGCTCCTTCAGGTTTGGAAATGCCATCGCCCCTGCCACCACCAGTACACAAACCCCCGCCGCCGCCACTTCAACCACAACCACACAAACCTCGGCCACGGCCACTTCAACCACCACCACCACCGGTAGGGCCACCACTTCAAGGAACACAGATGCAGCCCAATCCAGCAACCAGACTGCCGCGTCGCCCTCGTCAGCCCAATAGATTACAACGAAATGCAAACGTTTATCCCGCGAATGCTGAGCTAAATCATCCTTCGTGTAGTCAACTTTGCTGGCACTATATGAACGGGTACTGTAAGAGGGGGCGAGGTTGCGAGTTTGTGCACCCTAGTACACCCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK58825.1	1.1e-102	uncharacterized protein A4U43_C08F130
Swissprot	Q9SD34.3	5.2e-78	Zinc finger CCCH domain-containing protein 44
trEMBL	A0A443NKX6	2.0e-95	Zinc finger CCCH domain-containing protein 19

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G51120.1	36.02	1e-96	351		DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G03313	AT3G51120.1	658	311	19	12	586	156	786	36.02	1e-96	351
Asa7G03313	AT2G16485.1	443	241	8	12	435	645	1079	39.50	6e-81	299
Asa7G03313	AT2G16485.1	56	25	0	517	572	1307	1362	55.36	5e-15	80.5

Ortholog group

Species	Genes
Allium cepa	g424242.t1
Allium fistulosum	AfisC1G06223
Allium sativum	Asa7G03313.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02201.15	SWIB	Domain	163	236	52.0	4.3e-14
PF03126.15	Plus-3	Domain	305	407	65.2	6e-18
PF02213.13	GYF	Domain	519	562	42.9	2.7e-11

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003677	F	DNA binding
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0016570	P	histone modification
GO:0006352	P	DNA-templated transcription, initiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K01062	PLA2G7, PAFAH; platelet-activating factor acetylhydrolase	EC:3.1.1.47	Ether lipid metabolism	ko00565

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network