Detail information of Asa7G04381


Location
GeneChrStartEndStrand
Asa7G04381chr712231105431223114606+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008797141.13.0e-253LOW QUALITY PROTEIN: lysine-specific demethylase JMJ705-like
SwissprotQ9STM3.12.5e-204Protein RELATIVE OF EARLY FLOWERING 6
trEMBLA0A8B7CE746.9e-252LOW QUALITY PROTEIN: lysine-specific demethylase REF6-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G48430.149.520.0 735JMJ12;REF6relative of early flowering 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag94387.t1
Allium fistulosumAfisC1G04572
Allium sativumAsa7G04381.1
Arabidopsis thalianaAT3G48430.1
Oryza sativaLOC_Os01g67970.1; LOC_Os12g18150.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02375.14JmjNFamily265950.01.9e-13
PF02373.19JmjCDomain221340128.02e-37

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11446KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylaseEC:1.14.11.67 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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