Detail information of Asa7G04892


Location
GeneChrStartEndStrand
Asa7G04892chr713527012101352711261-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020254840.13.8e-87LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 5-like
SwissprotQ84W91.22.3e-52Zinc finger CCCH domain-containing protein ZFN-like 1
trEMBLA0A5P1FLP81.3e-84Zinc finger CCCH domain-containing protein 58

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G47850.150.356e-111 397Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag146366.t1
Allium fistulosumAfisC1G04087
Allium sativumAsa4G00116.1; Asa7G04892.1
Arabidopsis thalianaAT2G47850.1; AT2G47850.2; AT2G47850.3
Oryza sativaLOC_Os01g15460.1; LOC_Os01g15460.2; LOC_Os01g15460.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily285337.71.2e-09
PF00642.21zf-CCCHFamily759938.09.8e-10
PF00642.21zf-CCCHFamily11914437.71.2e-09
PF00642.21zf-CCCHFamily25027338.28.3e-10
PF00642.21zf-CCCHFamily29631924.61.5e-05

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03260EIF4G; translation initiation factor 4GEC:- RNA transportko03013

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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