result

Gene information

Detail information of Asa7G04948

Location

Gene	Chr	Start	End	Strand
Asa7G04948	chr7	1372782017	1372783889	-

Sequences

CDS

>Asa7G04948.1
ATGAGCTGTTTTTCTTGCTTTCTCAAAGGGAAACATCAGCTCAGTGAGGATAGCGATGAAGAGATTTTAAGAATTACTGAAAATGTGAAGACATTCACCTATAAAGAGCTGAGACATGCAACAAAAGATTTCTGGTTTGCTAATAAAATCGGCGAAGGAGGTTTCGGACCTGTTTACAAGGGAATACTTAAAGACGGGACAATTGTTGCTATAAAAGCATTGTCAAAGGAGTCCAATCAAGGAAAAAGAGAGTTCTTGACAGAGATAAATGTAATCTCTGACATAATCCATGAAAATCTTGCTGGATTATATGGCTGTTGTGTTGAAAAAGATCATAGAATTCTGATCTATGGCTATATCGAGAACAACAGCCTTGCTCAGACACTTCTCGGTTCAAATCACAGTGGCATTCAGTTCAGTTGGAAAGTAAGAACAAAAATATGCATTGGAATAGCTCAAGGACTTGCTTTTCTCCATGAGGAAGTTCGACCACACATTGTCCATCGTGATATTAAAGCAGGAAATATTCTTCTTGATAAAAATCTAAACCCTAAAATTTCAGATTTTGGATTAGCCAAGCTTCTACCTCCGGCTATGACACATGTTAGCACCCGTGTTGCTGGAACAATAGGTTACCTGGATCCGGAATATGCTATCCGAGGGCAGGTGACACGACAATCTGATGTCTATGGATTTGGTGTTCTTCTACTGGAGATTGTGAGTGGAAGAAGCAACACAGACATAAAATTATCATATGAAGAACAAATTCTTCTTGAATGGACATGGGTACTATATGAACAAGGTAAACTTTCAAGAGTCGTGGACGCTGAGATAAGTGAAGAATCAGATGTTAAAGAGGCATGCAAATTCCTGAAAGTTGGTCTTCTATGCACACAATATTTGCACAAGCTTCGCCCGTCCATGTCGAAAGCAGTTAAAATGTTGAAAGGAGAGATTGATGTAGACTCTATGAAGATTAATCATCCAGCTTTGATATCTCATATCATGGACTTCAGAAATAGAATCAATGATAATTCCATTGGCATGAAAAATACAGCATCTACTCTATCATCTCTTGGCACATCAGGTGCGACCATGAGCTTCGCCACAAGTGACAGAGAATAA

Protein

Gene

>Asa7G04948.1
ATGAGCTGTTTTTCTTGCTTTCTCAAAGGGAAACATCAGCTCAGTGAGGATAGCGATGAAGGTCATTAAACACTGTAAAAGATGTGCTATTAGTTCATCAATTGAATTTATCATAATGACATTGCGTATGTTATCATTTTTCCAGAGATTTTAAGAATTACTGAAAATGTGAAGACATTCACCTATAAAGAGCTGAGACATGCAACAAAAGATTTCTGGTTTGCTAATAAAATCGGCGAAGGAGGTTTCGGACCTGTTTACAAGGTACGGACTGCTTGATTGCTTTAGGAAAAACAGCGAAAAAAGCATTTATGCACATAATATATGGCTACTGATCAGCAGCATTGATTTAGGGAATACTTAAAGACGGGACAATTGTTGCTATAAAAGCATTGTCAAAGGAGTCCAATCAAGGAAAAAGAGAGTTCTTGACAGAGATAAATGTAATCTCTGACATAATCCATGAAAATCTTGCTGGATTATATGGCTGTTGTGTTGAAAAAGATCATAGAATTCTGATCTATGGCTATATCGAGAACAACAGCCTTGCTCAGACACTTCTCGGTAATTGTATATGTTCCATCTTGAAAATTACTGTTCATACCTAATTGCTGAATTAGAAGTTtctggtattcgaagggagtaaaatgaatcaaatttcaaCTGATTTCCCTTCATACATATGTACAACTTGCCAAATTTGGGAGAACTTCATGGTATATCAGTGTTGGTGTGTTCCCATTGCTTAACCATCAACTTTATGTAAACACGTACAGGTTCAAATCACAGTGGCATTCAGTTCAGTTGGAAAGTAAGAACAAAAATATGCATTGGAATAGCTCAAGGACTTGCTTTTCTCCATGAGGAAGTTCGACCACACATTGTCCATCGTGATATTAAAGCAGGAAATATTCttcttgataaaaatctaaaccctaaaatttcagattttggatTAGCCAAGCTTCTACCTCCGGCTATGACACATGTTAGCACCCGTGTTGCTGGAACAATGTCAgtttgttctctctctctctctatttttttttttttttttatttttttttattttgatacaaaATAAATTGGGCAATGTCTAAGAACTTCTGAGAAAGGCATATGCACAATAATATAACACAAATTCCAGATTATTCAAAAAGGCTTATACTGTCATTGAGAATGGActattaattgcatcttttatttgacATCTCAGAACTTAGTCAGATAAGTTATGCTATATATGGGGTTTTATTTTCTAGattttgttataaattatttttgaacaGAGGTTACCTGGATCCGGAATATGCTATCCGAGGGCAGGTGACACGACAATCTGATGTCTATGGATTTGGTGTTCTTCTACTGGAGATTGTGAGTGGAAGAAGCAACACAGACATAAAATTATCATATGAAGAACAAATTCTTCTTGAATGGGTATGTTACTTGTTTTATATGATTCTCCTCCGTTCTATTGAAATAGAAGAGCATGCATATGAATCATTAGTATGTACTTCTACTGTAGACATGGGTACTATATGAACAAGGTAAACTTTCAAGAGTCGTGGACGCTGAGATAAGTGAAGAATCAGATGTTAAAGAGGCATGCAAATTCCTGAAAGTTGGTCTTCTATGCACACAATATTTGCACAAGCTTCGCCCGTCCATGTCGAAAGCAGTTAAAATGTTGAAAGGAGAGATTGATGTAGACTCTATGAAGATTAATCATCCAGCTTTGATATCTCATATCATGGACTTCAGAAATAGAATCAATGATAATTCCATTGGCATGAAAAATACAGCATCTACTCTATCATCTCTTGGCACATCAGGTGCGACCATGAGCTTCGCCACAAGTGACAGAGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269570.1	4.8e-132	LOW QUALITY PROTEIN: putative serine/threonine-protein kinase
Swissprot	Q93YN1.1	2.5e-117	Cold-responsive protein kinase 1
trEMBL	A0A5P1ELQ0	1.3e-131	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16670.1	62.39	2e-122	435		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G04948	AT1G16670.1	343	124	3	1	341	1	340	62.39	2e-122	435
Asa7G04948	AT3G09010.1	343	160	4	4	340	3	342	50.73	2e-98	355
Asa7G04948	AT1G53430.2	331	150	2	7	337	594	915	51.96	4e-94	341

Ortholog group

Species	Genes
Allium cepa	g124499.t1; g333320.t1; g366430.t1; g536661.t1; g66594.t1
Allium fistulosum	AfisC1G03109; AfisC1G03647; AfisC1G03650; AfisC2G09370
Allium sativum	Asa6G00356.1; Asa7G04946.1; Asa7G04948.1; Asa7G04958.1
Arabidopsis thaliana	AT1G16670.1
Oryza sativa	LOC_Os02g06930.1; LOC_Os02g06930.2; LOC_Os02g06930.3; LOC_Os02g06930.4; LOC_Os04g52840.1; LOC_Os04g52840.2; LOC_Os06g46330.1; LOC_Os08g10070.1; LOC_Os08g10070.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	48	313	149.7	8.8e-44

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network