result

Gene information

Detail information of Asa7G05587

Location

Gene	Chr	Start	End	Strand
Asa7G05587	chr7	1549645853	1549647470	+

Sequences

CDS

>Asa7G05587.1
ATGGATTGTATTGACAATTATGGAGATGAGCTGATGATGCCAGGGTTTAGGTTTCACCCAACAGATGAAGAGCTAGTGAGCTTTTATCTCAAGAGAAAAATTCAGCAGAAGCCTCTTAGCATCGAACTGATCAGACAGTTGGATATCTACAAGTATGATCCCTGGGATTTACCAAATTTTGGGACTGGCGGAGAAAAGGAGTGGTACTTTTACTGTCCAAGAGACCGTAAATACAGAAATAGTGCACGCCCAAACAGAGTCACCGGAGCTGGATTCTGGAAAGCAACAGGAACCGATAGACCGATATACTCATCTGAGGGTAACAAATGCATAGGCCTAAAAAAGTCGCTTGTATTTTACAAGGGTAGAGCTGCAAAAGGGACCAAAACCGATTGGATGATGCATGAATTCAGACTTCCTTCTGTTAATGATTCCTCCTTCCCCAAAAGACCGATCGAGAAGACAATTCCCATCAATGAAGCTTGGACTATTTGTAGAATATTCAAGAAAACAAACCCTGTGGCGCACAGGGGGATATCTCAGTCATGGGTATCACAGTTTCAAGAAACAGCTACTACTGAATCAGACATGTTTCCAGTTTATGAAACCGTATATGCAAATCAACTAGTCTTATCAGACTCTGAACCATCTTCATCTTCGAGCCAGTTCAATGTCCCTGCTAAAGAATCCGACCTGCCCACTTTTGCATTTTCTCAGGAAGATGTGCTGCTGGATTCTATGCAACTTAGCTTTAGTCAGATTCCATGGAATAATGAACTAAGGATTGCTGTGCCTTTTCTGTTTAATGATGAGATAAGATCAAACACTGACAGGGTAGTTGTCAACAATACATCAAACACTGACAGGGCAGTTGTCAACAATACGCAGGGGATTAGTTTTCCATTCAATTTGTCTCCTCTTATAGAAGACTGGAGATCGAATTTTATGTGGGAATCACCTGCTTTATCTAGTGAGCTAACTACTGGACTTTCTACAAGTGTATGA

Protein

Gene

>Asa7G05587.1
ATGGATTGTATTGACAATTATGGAGATGAGCTGATGATGCCAGGGTTTAGGTTTCACCCAACAGATGAAGAGCTAGTGAGCTTTTATCTCAAGAGAAAAATTCAGCAGAAGCCTCTTAGCATCGAACTGATCAGACAGTTGGATATCTACAAGTATGATCCCTGGGATTTACCAAGTaagcaaacaaatttattttattagtatCTTAATTGGCTACTGAATACTTTTCTCATTATTCTATCATTTTAAGACAATTTTTGTTTTTGCATAAATATAAACTCCGAATTTTACCATTGATGCAGAGCTTTTTTTTGCTAAAGTAGGCGTGCTGTAACAATTTAGTTAGATAACTGCAAAATGAATTTTAGTATGTTGACTTATTTGAGCAGACATGGAAGTTTAACTACTGAAAACTTTTGAGTTGACAGTCGTTACTTTCTGGCACTTAATGTTATCCTCTATGTTATCTACTTGTTTGTCTGCATTCAATTGTTTTTCTATGTACgaaagcatgtttaatcactaatCAGAGCCATACTTTTGTATGTACACAAATGTTTCTGATATTTCCAACAATGCAAGATTATCATATTAAACCATACAAGAGAGAATAAATGCTGAATTTTAACTTTCCTAACTAACTTAACTAACTTTCATCATTTTATCCAAATGAAGATTTTGGGACTGGCGGAGAAAAGGAGTGGTACTTTTACTGTCCAAGAGACCGTAAATACAGAAATAGTGCACGCCCAAACAGAGTCACCGGAGCTGGATTCTGGAAAGCAACAGGAACCGATAGACCGATATACTCATCTGAGGGTAACAAATGCATAGGCCTAAAAAAGTCGCTTGTATTTTACAAGGGTAGAGCTGCAAAAGGGACCAAAACCGATTGGATGATGCATGAATTCAGACTTCCTTCTGTTAATGATTCCTCCTTCCCCAAAAGACCGATCGAGAAGACAATTCCCATCAATGTATGACTGACTGACTACTATATGTTATGCAAAATAATAagtgtatacatacacatatacatacatacatatccaaCAGAGGTTGACGTATATTCTTTTTGAAATATCTGTAGGAAGCTTGGACTATTTGTAGAATATTCAAGAAAACAAACCCTGTGGCGCACAGGGGGATATCTCAGTCATGGGTATCACAGTTTCAAGAAACAGCTACTACTGAATCAGACATGTTTCCAGTTTATGAAACCGTATATGCAAATCAACTAGTCTTATCAGACTCtgaaccatcttcatcttcgaGCCAGTTCAATGTCCCTGCTAAAGAATCCGACCTGCCCACTTTTGCATTTTCTCAGGAAGATGTGCTGCTGGATTCTATGCAACTTAGCTTTAGTCAGATTCCATGGAATAATGAACTAAGGATTGCTGTGCCTTTTCTGTTTAATGATGAGATAAGATCAAACACTGACAGGGTAGTTGTCAACAATACATCAAACACTGACAGGGCAGTTGTCAACAATACGCAGGGGATTAGTTTTCCATTCAATTTGTCTCCTCTTATAGAAGACTGGAGATCGAATTTTATGTGGGAATCACCTGCTTTATCTAGTGAGCTAACTACTGGACTTTCTACAAGTGTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243874.1	7.4e-100	putative NAC domain-containing protein 94
Swissprot	Q9ZVH0.1	1.4e-82	NAC domain-containing protein 9
trEMBL	A0A5P1F6X4	3.8e-98	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G26870.1	71.35	4e-80	295	ANAC009;FEZ	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G05587	AT1G26870.1	192	54	1	5	195	16	207	71.35	4e-80	295
Asa7G05587	AT5G39820.1	190	47	2	9	184	17	206	67.89	4e-76	281
Asa7G05587	AT2G43000.1	162	51	2	9	170	15	167	62.96	1e-59	227

Ortholog group

Species	Genes
Allium cepa	g183050.t1; g205624.t1; g253389.t1; g253410.t1; g253415.t1; g308295.t1
Allium fistulosum	AfisC1G03412; AfisC1G03417; AfisC1G03418; AfisC1G03419; AfisC4G00755
Allium sativum	Asa4G00742.1; Asa7G05587.1; Asa7G05588.1; Asa7G05591.1
Arabidopsis thaliana	AT1G26870.1; AT5G39820.1
Oryza sativa	LOC_Os08g33910.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	14	139	91.2	5e-26

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12581	CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8	EC:-	RNA degradation	ko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network