Detail information of Asa7G05643


Location
GeneChrStartEndStrand
Asa7G05643chr715629689161562973719+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrMQL80646.11.6e-30hypothetical protein
SwissprotB9DI20.12.5e-20Squamosa promoter-binding-like protein 13A
trEMBLA0A843UEY91.1e-30SBP-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G50570.143.802e-2094.7SPL13;SPL13ASquamosa promoter-binding protein-like (SBP domain) transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag324042.t1; g519605.t1
Allium fistulosumAfisC2G01928; AfisC5G01443; AfisC5G06098; AfisC7G00933
Allium sativumAsa1G00760.1; Asa4G00969.1; Asa4G01000.1; Asa5G01689.1; Asa6G05722.1; Asa7G05643.1; Asa7G06666.1
Arabidopsis thalianaAT5G50570.1; AT5G50570.2; AT5G50670.1
Oryza sativaLOC_Os11g30370.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain7913161.75.3e-17

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13415BRI1; protein brassinosteroid insensitive 1EC:2.7.10.1 2.7.11.1 Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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