Detail information of Asa7G06346


Location
GeneChrStartEndStrand
Asa7G06346chr717445845401744591920+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020260406.11.4e-127transcription factor E2FA-like
SwissprotQ9FNY0.14.1e-92E2F transcription factor-3
trEMBLA0A5P1F3F19.9e-128E2F_TDP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G36010.150.241e-96 350ATE2FA;E2F3E2F transcription factor 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag134652.t1; g534213.t1
Allium fistulosumAfisC1G07709; AfisC6G01905
Allium sativumAsa7G06346.1; Asa8G04689.1
Arabidopsis thalianaAT2G36010.1; AT2G36010.2; AT2G36010.3
Oryza sativaLOC_Os02g33430.1; LOC_Os02g33430.2; LOC_Os04g33950.1; LOC_Os12g06200.1; LOC_Os12g06200.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain10416782.41.6e-23
PF16421.2E2F_CC-MBDomain180279114.61.9e-33

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06620E2F3; transcription factor E2F3EC:- Cell cycleko04110
Cellular senescenceko04218

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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