Detail information of Asa7G06585


Location
GeneChrStartEndStrand
Asa7G06585chr718173558481817362568+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA58890.13.9e-56Mediator of RNA polymerase II transcription subunit 31
SwissprotQ8VYB1.14.3e-44Mediator complex subunit SOH1
trEMBLA0A2I0ATM22.8e-56Mediator of RNA polymerase II transcription subunit 31

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G19910.164.188e-61 229MED31SOH1 family protein

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Ortholog group
SpeciesGenes
Allium cepag259383.t1
Allium fistulosumAfisC1G08243
Allium sativumAsa7G06585.1
Arabidopsis thalianaAT5G19910.1; AT5G19910.2
Oryza sativaLOC_Os07g07020.1; LOC_Os07g07020.2; LOC_Os10g41450.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05669.9Med31Family32124122.74.3e-36

Gene Ontology
AccessionOntologyName
GO:0001104FRNA polymerase II transcription cofactor activity
GO:0006355Pregulation of transcription, DNA-templated
GO:0016592Cmediator complex

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15153MED31, SOH1; mediator of RNA polymerase II transcription subunit 31EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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