result

Gene information

Detail information of Asa7G06995

Location

Gene	Chr	Start	End	Strand
Asa7G06995	chr7	1933240750	1933243409	-

Sequences

CDS

>Asa7G06995.1
ATGCCATCAGTTAACTCCAAAGTTTACTATTTCCCACAAGGCCATGCCGAGCATTCTCAATCTCATATTGATTTCGGAAGTTCTTCAAAGATTCCACCCTTTGTACTTTCGCGAGTTGCTTCAGTCAAATTCTTAGCAGATCCAGAAACAGACGAAGTGTTTGCAAAGATCCTTCTAGTGCCGATCCAACAGCATGAACTAGATATCAACGAGGACGAACAAGGAGTGAGCAATGTGGCATCTGAGCTGCATGAAAAGCCCTCTTCATTTGCTAAGACTCTGACTCAGTCCGATGCTAACAATGGCGGTGGATTCTCAGTGCCTCGTTACTGTGCTGAGACCATATTTCCTAAACTGGATTATACAGCAGATCCTCCAGTTCAGACCATTCTTGCTAAAGATGTGCATGGAGAGGTTTGGAAGTTTAGGCATATTTATAGAGGTACTCCTAGAAGGCATTTGTTGACTACTGGATGGAGCACTTTTCTGAATCAAAAGAAGCTGGTGGCAGGAGATTCGATTGTGTTCTTAAGAGCGGAGAATGGTGATTTATGTGTGGGGATTAGAAGGGCAAAGAAGGGCATTGGTTGTGGGCCTGAGCAACCTACTGGATGGAACCCACCACAAGCTTATGGTGGTGGTGGGGTGTCTATGTATTCAAGAGAGGAAGAGAATAATAATAGTATGAGAATGATGAGAAACAATGCCAGTTTGAAAACAAAGAGTCGAGTAATGAGCGAGTCGGTCATCGAGGCAGCTAGACTTGCAGCAAGCGGCCAGCCGTTTGAGATAGTGTACTACCCTAGGGCAAGTACCCCAGAATTTTGTGTTAAGGTAGGAGCAGTTAGAGCTGCGATGCGAGTTCAATGGTGTCCGGGGATGAGGTTTAAGATGGCATTTGAAACGGAAGATTCTTCTAGGATTAGTTGGTTTATGGGTACTATTTCTTCTGTACATGCAGCAGATCCGATCCATTGGCCGAATTCGCCTTGGAGACTTCTTCAGGTGGCATGGGATGAGCCAGACCTCCTTCAGAACGTAAAGCGGGTAAGCCCATGGCTAGTGGAACTAGTTTCAAACATGCCGGCTATTCATCTATCGCCTTTTTCCCCACCAAGGAAGAAATTGTGTATCCCTTCGAACTCCGAATTCACACAGAACAATCACCATTTTCCACCATTACCCACCTTCATTTCAAACCCCCATGGGCCCTACAAGGGCATACAGGGAGCCAGGCATGCTAATAACTACAGTGGTGGTGGTTGTGGTGTTGGTGGTAGTGGCAATAACGCCATTTCTATCCCAGATTTTCATTTCAAAAAACTTCAACCTGGGCTTTTTCACCCGGGCTTCCTCATTCGGAGTAGGCATCAAAGTAGTGAAAAGCTCATAGACGATGACATCTCCTGTTTGCTAACCATAGGATGTCCTGGTATGAACAGCGAGAAGCTGAGACAAGTGAACGTGAAAAAAGCTTCTCAGTTGGTTCTTTTTGGGAAGCCTATATACACCGAAGAACAGATATCTCTAAGTAGTGGTGCTGGTTCACGGTACAGCTCCTCCGAAGGAGGCAATACTGAAAAATCATCGGATGAATCACTTCCCTCGAAGCTGGAAGTGGGGCATTGTAAGGTATACAAGGAACACGATGATGTTGGTAGAGATCTTGATCTTTCCTTATTGGGATCCTACGAAGAGCTGTACATGAAACTGGCAGATACCTTTGGACTCGACAAATCAGTGATCATTGGTCGCTTATGTTATCAGGATGTAACTGGTTCTGTTAAACTCGACACTGGTGCACCTTTCAGTGAATTCGCAAAGAGGGCAAGGAGACTCACCATAGTAATGGATTCAAGCAGCTGCAGCAGCATATAA

Protein

Gene

>Asa7G06995.1
ATGCCATCAGTTAACTCCAAAGTTTACTATTTCCCACAAGGCCATGCCGAGCATTCTCAATCTCATATTGATTTCGGAAGTTCTTCAAAGATTCCACCCTTTGTACTTTCGCGAGTTGCTTCAGTCAAATTCTTAGCAGATCCAGAAACAGACGAAGTGTTTGCAAAGATCCTTCTAGTGCCGATCCAACAGCATGAACTAGATATCAACGAGGACGAACAAGGAGTGAGCAATGTGGCATCTGAGCTGCATGAAAAGCCCTCTTCATTTGCTAAGACTCTGACTCAGTCCGATGCTAACAATGGCGGTGGATTCTCAGTGCCTCGTTACTGTGCTGAGACCATATTTCCTAAACTGGATTATACAGCAGATCCTCCAGTTCAGACCATTCTTGCTAAAGATGTGCATGGAGAGGTTTGGAAGTTTAGGCATATTTATAGAGGTACTCCTAGAAGGCATTTGTTGACTACTGGATGGAGCACTTTTCTGAATCAAAAGAAGCTGGTGGCAGGAGATTCGATTGTGTTCTTAAGAGCGGAGAATGGTGATTTATGTGTGGGGATTAGAAGGGCAAAGAAGGGCATTGGTTGTGGGCCTGAGCAACCTACTGGATGGAACCCACCACAAGCTTATGGTGGTGGTGGGGTGTCTATGTATTCAAGAGAGGAAGAGAATAATAATAGTATGAGAATGATGAGAAACAATGCCAGTTTGAAAACAAAGAGTCGAGTAATGAGCGAGTCGGTCATCGAGGCAGCTAGACTTGCAGCAAGCGGCCAGCCGTTTGAGATAGTGTACTACCCTAGGGCAAGTACCCCAGAATTTTGTGTTAAGGTAGGAGCAGTTAGAGCTGCGATGCGAGTTCAATGGTGTCCGGGGATGAGGTTTAAGATGGCATTTGAAACGGAAGATTCTTCTAGGATTAGTTGGTTTATGGGTACTATTTCTTCTGTACATGCAGCAGATCCGATCCATTGGCCGAATTCGCCTTGGAGACTTCTTCAGGTTTGCCTTAGTCTGTTCAAATcaagtaaatattatatattgtatacctgaaactaaattttgtttggataaactaaattgaaatttaaattgaagtgTAAATGGAACCCGTTTGGATAAAAGAGTTGAATAGTAACATTGCATAATCTTAGTGAATAGCCAAATATAGAAGTGTTTGGATAAACAAGTTGAAATTGTTGTAAAACTTAGTAGTGGAAGCTGAAATAAGTCATATGACAGTATATGTTGCTCATAACACATCAATTTGACAATTTCTAAGCAGCTTATCTCACCTCAGGAGTAGTAATAAATTACTTAAAGGTTTATTTCTCAACTACTTTTGGGTTGTGAAACATGTTAATGCTCCAGATAGTTTGCAAAAGGATTCAATATTATCTTTACGATTCAAACTTAGCTTGTTGGTTTTTCTGCTTAGGGCAGATGAGTTACCATTAAGGTATTCCAGATGTATGAAGCCTGTTTttcaagttaaataattaaaattgggtTTGTAGGTGGCATGGGATGAGCCAGACCTCCTTCAGAACGTAAAGCGGGTAAGCCCATGGCTAGTGGAACTAGTTTCAAACATGCCGGCTATTCATCTATCGCCTTTTTCCCCACCAAGGAAGAAATTGTGTATCCCTTCGAACTCCGAATTCACACAGAACAATCACCATTTTCCACCATTACCCACCTTCATTTCAAACCCCCATGGGCCCTACAAGGGCATACAGGGAGCCAGGCATGCTAATAACTACAGTGGTGGTGGTTGTGGTGTTGGTGGTAGTGGCAATAAcgccatttctatcccagattttcatttcaaaaaactTCAACCTGGGCTTTTTCACCCGGGCTTCCTCATTCGGAGTAGGCATCAAAGTAGTGAAAAGCTCATAGACGATGACATCTCCTGTTTGCTAACCATAGGATGTCCTGGTATGAACAGCGAGAAGCTGAGACAAGTGAACGTGAAAAAAGCTTCTCAGTTGGTTCTTTTTGGGAAGCCTATATACACCGAAGAACAGATATCTCTAAGTAGTGGTGCTGGTTCACGGTACAGCTCCTCCGAAGGAGGCAATACTGAAAAATCATCGGATGAATCACTTCCCTCGAAGCTGGAAGTGGGGCATTGTAAGGTATACAAGGAACACGATGATGTTGGTAGAGATCTTGATCTTTCCTTATTGGGATCCTACGAAGAGCTGTACATGAAACTGGCAGATACCTTTGGACTCGACAAATCAGTGATCATTGGTCGCTTATGTTATCAGGATGTAACTGGTTCTGTTAAACTCGACACTGGTGCACCTTTCAGGTACTTTTTCTACTTTTTGAATCGAATTGTATCATCCTGATTtccttttttgatgatgataataataCTAGATATATCTCCATTTCAACAGATACAAAACATATAGCCTTGGTTATTCATAAAAACAATGAGATGGAAATGTGACATGGATACGACAATTTAACAAATTTTCTCCTTTGTTAATGGCCCAAACTggttttgtatatatgcataaaaacGTATCATTTTTACCATTGTCGGATTAAATAAACTTCATATTTGTTTCAGTGAATTCGCAAAGAGGGCAAGGAGACTCACCATAGTAATGGATTCAAGCAGCTGCAGCAGCATATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020259738.1	1.5e-223	auxin response factor 18-like isoform X2
Swissprot	Q653H7.1	2.0e-188	OsARF10
trEMBL	A0A5P1EYY5	1.1e-223	Auxin response factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G30080.1	55.44	0.0	652	ARF16	auxin response factor 16

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa7G06995	AT4G30080.1	671	221	19	1	625	31	669	55.44	0.0	652
Asa7G06995	AT2G28350.1	655	254	15	1	618	22	659	52.98	2e-178	622
Asa7G06995	AT1G77850.1	380	196	7	1	379	31	398	45.00	1e-90	330

Ortholog group

Species	Genes
Allium cepa	g192625.t1; g448434.t1
Allium fistulosum	AfisC1G08708; AfisC7G04848
Allium sativum	Asa3G01183.1; Asa7G06995.1
Arabidopsis thaliana	AT2G28350.1; AT4G30080.1
Oryza sativa	LOC_Os02g41800.1; LOC_Os02g41800.2; LOC_Os04g43910.1; LOC_Os06g47150.1; LOC_Os06g47150.2; LOC_Os06g47150.3; LOC_Os06g47150.4; LOC_Os10g33940.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02362.18	B3	Family	90	191	73.7	8e-21
PF06507.10	Auxin_resp	Family	252	335	114.9	1.3e-33

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0009725	P	response to hormone

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14486	K14486, ARF; auxin response factor	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network