result

Gene information

Detail information of Asa7G07167

Location

Gene	Chr	Start	End	Strand
Asa7G07167	chr7	1992913985	1992914904	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020252214.1	1.9e-56	NAC domain-containing protein 100-like
Swissprot	Q9FK44.1	1.7e-54	NAC domain-containing protein 87
trEMBL	A0A5P1FJB1	1.3e-56	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18270.2	63.87	7e-55	210	ANAC087	Arabidopsis NAC domain containing protein 87

>>>Show top 3 blast result

Ortholog group

Species	Genes
Allium cepa	g15758.t1; g230464.t1; g402158.t1; g422842.t1; g523460.t1; g69493.t1; g73352.t1
Allium fistulosum	AfisC1G08943; AfisC5G02503; AfisC5G02509; AfisC6G04754; AfisC7G01939; AfisC7G02655; AfisC7G04462
Allium sativum	Asa3G01466.1; Asa3G02772.1; Asa3G03293.1; Asa7G07167.1; Asa7G07168.1; Asa7G07182.1; Asa8G02536.1
Arabidopsis thaliana	AT2G24430.1; AT2G24430.2; AT3G15170.1; AT3G18400.1; AT3G29035.1; AT5G07680.1; AT5G07680.2; AT5G18270.1; AT5G39610.1; AT5G61430.1
Oryza sativa	LOC_Os03g42630.1; LOC_Os04g38720.1; LOC_Os06g23650.1; LOC_Os07g48550.1; LOC_Os09g32260.1; LOC_Os09g32260.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	11	139	95.7	2e-27

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12581	CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8	EC:-	RNA degradation	ko03018

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network