Detail information of Asa7G07295


Location
GeneChrStartEndStrand
Asa7G07295chr720215979632021601965+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrALI87040.11.2e-24phytochrome interacting factor 1
SwissprotQ8GZM7.11.7e-20bHLH transcription factor bHLH015
trEMBLA0A0P0C6U28.6e-25Phytochrome interacting factor 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G20180.137.255e-29 125PIF1;PIL5phytochrome interacting factor 3-like 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag46766.t1
Allium fistulosumAfisC1G09167
Allium sativumAsa7G07295.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain21626149.72.3e-13

Gene Ontology
AccessionOntologyName
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16189PIF4; phytochrome-interacting factor 4EC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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