result

Gene information

Detail information of Asa7G07588

Location

Gene	Chr	Start	End	Strand
Asa7G07588	chr7	2104720388	2104724436	-

Sequences

CDS

Protein

Gene

>Asa7G07588.1
ATGGGACATCACCACAAAATACTCCTCTTGTTCACCACATTAGTGATCCTCATCTCCTCCTCAATTGCTAGGTACACCCTCACTCCCACCACCCCTTTACCTGACAATGAAACCCTCCTCTCTGCTTCCGGTTCCTTCGCTTTTGGGTTCTTCAATCCAAATCCAAAACACCGCTACATCGGGCTATGGTACAACCAAATACTAGGAAATAAAGTGTTATGGGTTGCAAACCGAGCAGACCCATTAGTAAACTCGCCTGGAATCTTATCCATCACCCCCAATGGCACCCTCACCATCACCGACAAAAACTTGAGGGTGGTTTGGTCGTCAAATTCGTCAACTAAACTCTCCAACCCAATAGCTCAACTTCTAGATGACGGTAATCTCATTGTCAAAGAATCAGGAGACGATAAATCAAATTACACTTGGCAAAGTTTTGATTACCCAACCGACACACTCTTAGCGGGTATGAAAATGGGAGTGGATTTCACCACAGGCTTGAACCGGACCTTGAATTCCTGGTCTAGTCCTAGTGACCCGACCACAGGAACATTCCATGTACACGTGGAAACACAAGGAAATCCCGAAGTCTTCCTTAGTAGCAGTACAAATCAAATATGGAGGTCTGGGGCTTGGGATGGGGCACGCTTCAGCGGAGTACCCACCATGTGGAAGTATCAAGGTATCTACCTCAGTTTTGTCAATGATAAGTTTGGGGTGACGTATTCCTACCAGCTCGAACCATTTGTCATATCCATACTATCTGTGGATTCTTATGGAATTTACAAACGATTTATCTGGGTGAATGGCACAGAAGAATGGAATAACGAATTCAGTCTGCCGAAGGATTTGTGTGATCATATAGGTAAGTGTGGGAATTATGGCTTGTGTGACATGAATATGTCACCAATATGCAATTGTTTAAGTGGTTTTGAACCTACGAACCGGGTTAAATGGAACACTTTGAATGATTGGAGTGATGGATGTGTTAGGAAGCACACGTTGGAATGTGAGAATGGAGGAGTAGATGAGTTTAGGCTGGTGAGTAATGTGAAGCTACCACAAAGTGAAGATTGCACGgttgatttgagtttgaaccttGATGAGTGCAAAAGTTTGTGTTTGATGAACTGTTCGTGTACTGCTTATGCTAGTGCGGTTGCGGTTAACGGTAGCGGATGTTTGATTTGGACTGGGGCGTTGTTTGATATGAGGACTTATAGTACTACTTCTGGACAGGATCTGTATATGCGCCTGAATGCTATTGGTGTGGCTGTCTCTGTGCCTAAAGGTAAGCATTGCTCTTCGTTTGGTTTCTGGGTGCCCCTTCACGCACACACGCATGCacgtatatttatttatatatgtatgtatttcagAGAAAgtagtatgaacttgaaaattgGTAACTACTATTCTATAGTTCCGAACAAAGGTTCTGCATTTCCATCATATAATCTAAAGGCCTTCCTAATTTTTATAATTAAGAGTGGATGTTAATCCTTTCCTCATATTGCACATGGCTCAACATCATATTTTCTTCACGAATCTCCCCAAATGTGATGTGTCTAAAAGTCGAAACTTAATTGTAGATATGACATTGTTACCATCAAAATCACACCCAAAAGTTTAGTCCATTTCGAAACTTTGTCTCATTCAACAATTCAAGTTAACATGAGGCAACTGGAGCGTTTGTAttaaattttgatatcaaatacagtTGATGAGCTCAAATAATTAAAAGTATAAGAAAAAACATGGAGATGATCTTAATAGCAAATGAATTTTATTGAAACGGTTCTATTTCTATAACTATAAACTCAAACGATGAATGTGGATTTTGATGgggtaaaaaagaaaaaaagttttaACTTTGCTAGTGCATTGCCGTACACACACAATCTTATAAAGTCATGTTCCTCTGCTCACAATtcttttttctatgtttatatacacatacacaaaCTCACCATACCCGATTTATCAAGAGAATTGTGTGTGAGGTGTGATTCTTTTCATTCATCGCCAATTTTACACAAGAGCATATTCAGTATTTCATATTCTATGCATGCACATGTACACACGCACTCATATGAGCTTTTCATATTGTCATTTTTCATAAAGATTGATTTGGTAGGTTCACGGCCAGCTGGTAGCAAATCCCACGGTGGAGGAGTTGTGCCTATTGTGGTTAGTCTAGTTGCTGGAATTTTGCTGATGAGCTGTGTTGGTTGTGTCTTATGCATGAGAaggaagaaatatagaaaatgtgaGATAACACTGCTTAATATTTTTGTCAGTGCAATGCATGTGCACTGGTGGTGAAAATTAAAGCTGTCAAATTTCTTataaaattgtcatcttttgtTAACCTTTTCAATGATCTTGGGTGCAGTGAATCCTCACAGTAATCTATTTAAACATGAACATAGAGATGAATCAATAGATCTTCCATTGTTCGTTTTGGATGATATTCTTGCAGCAACGGACTGTTTCTCATCCAATAATATACTCGGAGAGGGCGGATTTGGACCAGTTTATAAGGTTTACATTTTCTCTCTTGTGCTTTACtataattaaacataaataaaaactaCAGGCTGTGTATGATATTAGAAAATGTGATGATGTATATGTTGATCTAACACTTGATAAGAAATCAACCAGGGTAAGCTAGGGGATGATCAAGAAATAGCGGTGAAAAGGCTCTCAAAAACATCAAGTCAAGGTTCGGAAGAGTTCAAAAATGAAGTTATGCTTATTGCCAAACTTCAACATATAAACCTTGTTCGTCTTCTTGGTTATTGCACTCAAGGAGAAGAAAGAGTGCTTATATACGAATACTTGCCTAACAATAGTTTGGATGCTTTCTTGTTTGGTAAATTTTATCTCTTTCAAAACTTCTTGTTTCAATTTCAtacatatattagacacttatttTACATTCAAATGAAGAGAAAAGGACATTGCTGAACTGGAATACTCGATATCAAATCATTACTGGGATTGCTCGAGGACTTCACTATCTTCATCATGATTCCAGATTAAAAATCATTCATCGCGATCTTAAAGCTGGGAATATTCTTCTAGATGGGGATATGATTCCTAAAATCTCTGATTTTGGTATGGCACGAATCTTTAGCGGCGATGAAACAGATTTCAATACTAGAAAAATCGTTGGAACGTAGTAAGTATATCAGTTCATCGTTATCATATATAAATGACTTGATTCACAAAAGAAACTTCTAAGCTATTTAACAATGTAGCGGATATATGTCTCCTGAATATGCCATGGATGGAGCATTTTCAATGAAATCAGATGTATTTAGTTTTGGTGTGTTGGTTCTAGAAATTATTAGCGGAAAAAAGAACAGAGTTTATGCGAAACCACTGCATATTAATCTTCTTGCGCATGTAAGTTCCCATTGTCTCATCTTTATTAGCATTATCATAGCAGTATGCATCCCAAAATGTAAGTAGTGTTCGTTTACATTTTCAGAATTGTTAACAGAAATAAAAGGTTTCGGAACCACTACGTTCCTTGACGTGCAACATTAGGGCACTAATTaggacaaaattaattttatgtacAGACCTgcaatagaaaagaaagaaagaaagaaagagaaaaagaaaaccaGAACTATTTTAACGTCAGTTCTAGTTGCAAACTTGTCACTGAGAGACACAGTGCATAGTTTTCAATTATaattttgttatttcaaaatattttctgaTCAAAATAGGCATGGAATTTATGGAAAGAAGGAAACGAAATGCAATTAATCGATGATTCAATGGGCGACTCCTTTTCATGTGATGAAGTTCAAAGGTGTATAAAACTTGGGTTATTGTGTGTACAAGAGCATCCAGAAGACAGGCCTCTAATGTCATCAGTAGTACAAATGTTCGGTAGTGATATAAAGACAATACCACAACCAAAGCAACCTGGTTTCACAGGAAGGATTCATCATCCTGAAGTGGATTTACCCAGCAATCATGATTTTAGTTCCAATGAACCGAGCATCACGGCAATTGAACCAAGATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256477.1	4.8e-259	receptor-like serine/threonine-protein kinase SD1-8
Swissprot	O81905.1	4.1e-199	S-domain-1 (SD1) receptor kinase 8
trEMBL	A0A5P1F8I1	5.5e-257	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	48.05	0.0	699	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa7G07588	AT4G21380.1	795	340	17	21	747	26	815	48.05	699
Asa7G07588	AT1G65800.1	812	357	17	3	747	8	813	47.04	691
Asa7G07588	AT4G27290.1	794	391	18	4	777	8	783	45.97	679

Ortholog group

Species	Genes
Allium cepa	g112747.t1; g247636.t1; g290102.t1; g291250.t1; g41186.t1; g439163.t1; g492461.t1; g492465.t1
Allium fistulosum	AfisC1G00160; AfisC1G00162; AfisC1G00168; AfisC1G00169; AfisC1G00195; AfisC1G00197; AfisC1G00515; AfisC1G00519; AfisC3G00075
Allium sativum	Asa0G00061.1; Asa0G03005.1; Asa2G00286.1; Asa4G01602.1; Asa6G05776.1; Asa7G00230.1; Asa7G00231.1; Asa7G00336.1; Asa7G00337.1; Asa7G00368.1; Asa7G00380.1; Asa7G00642.1; Asa7G00644.1; Asa7G00680.1; Asa7G00681.1; Asa7G00685.1; Asa7G00693.1; Asa7G01016.1; Asa7G05514.1; Asa7G06044.1; Asa7G07510.1; Asa7G07542.1; Asa7G07543.1; Asa7G07588.1; Asa7G07590.1
Arabidopsis thaliana	AT1G65790.1; AT1G65800.1; AT4G21380.1; AT4G27290.1
Oryza sativa	LOC_Os01g57560.1; LOC_Os03g35600.1; LOC_Os04g54070.1; LOC_Os05g42210.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	71	176	97.9	2.8e-28
PF00954.17	S_locus_glycop	Domain	207	314	96.2	1.5e-27
PF08276.8	PAN_2	Domain	337	404	65.3	3.3e-18
PF07714.14	Pkinase_Tyr	Domain	467	731	169.9	5.7e-50

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network