result

Gene information

Detail information of Asa8G00042

Location

Gene	Chr	Start	End	Strand
Asa8G00042	chr8	9381759	9384306	+

Sequences

CDS

>Asa8G00042.1
ATGCTGCAACCAAACCCAAGCTTGCTCTTCCTCTTCATCACCATCATCATCTACTCTCCTCTAAGCAGCCATGCTCAGCTGCCTTTTGATATCCCATCAGCAAATATATCGACAAAATGGATAAACAACGACCAGTCCATAAAACAGAACCTCATATTTGATGACTATTCAACCGCAAGTTCCATCCTCATAAGAAAAACACATGGTCCAACATTTGGTTGCGGCTTTATCTGCACTACTGGATCATGTACTTCCTACCTATTTTCCATTTACATAGGTTACTTAGCCCAAAGTGGGAATTCCACCTCCCCACCAATTGTATGGTCAGCCAACCGTGACCGCCCTGTTCGAGCAAATGCCACTTTAGAATTTTCCAAAAACGGGGATTTGCTTCTAAAGGATTTTGATGGCACCCCCGTCTGGTCTACTAATACTTCTGGAAAGTCAGTGGTTGGTATGAAGTTAAATGGAGTTGGAAGTCTCGTGCTTTACGATAACAAGAACAAAACTGCTTGGTCATCTCTTGATCACCCTACCGACTGTTGGGTTCTTGGCCAAACGCTGAGACAGGGTCAACGTCTGACAGCTAACGTTTCTTTTGCTAATTCGACCCAAGGGGATGTTTTCCGGGTTGCTTATTACCACCATGATGATTATTGTACATATCCCAATGTCTGCGGAGAGAATGGAATATGTTCCAATGGACAGTGTTCTTGTCCAGCTTCGGATGATGGCAGTATAAATTACTTTAAACCGGTCGATCATACGAATCCTAACCTTGGTTGCGTGCCATTTAATGCTCTTTCATGCAACTCATCCAAAACACATAAACTTTTATCGCTCTTCAATGTATCTTATTTCTCCATCGATCGAGGAGCAGCCCCGTACAATAACAATACAAATGCTGAAGCTTGCAAGCAAGCATGTTTGGCAAACTGTTCTTGCAAAGCTGCATTTTTTCAATATGATAATGAAGAGAAAGATTTTGGAACTAACTGTTACTTGGAATACGAGTTGTATTCGTTGAATGGCAATCTACCACATTATAACAACATATATTCATCTGCATTTATCAAAGTGCAATCATTTCCTACTACAAATATGGCATCTAGAACAAACTCCAGTAACTCTAACTTTATACGAAGTAAAGTTAGCGTTAGAGTTATAGCTGGTGCTAGCGTCGCATCTCTACTTGCTTTTATTCTTATCATTGCATGCGCCATAGCTTTTGTGAGGAGAAAATATAGTTATAGAGAAGTTGAGGATGTTGATGAATTCGCTATGTTACCTGGACTACCTACAAGATTTGCCTTTGAAGATCTTAGGGTTGCTACTGCCGACTTCTTACGAAAACTTGGGGAAGGTGGATTCGGTTCGGTTTTCGAAGGAACACTAATTGATGGTACTAAAGTAGCCGTTAAAAGATTAGACAGTGCTGGTCAAGGTAAAAAGGAATTTTTAGCCGAGGTTGAAACCATTGGTAGCATTCATCATGTACATTTGGTGAGATTGATTGGATTTTGTGCAGAAAAGTTTTATAGGCTTTTGGTTTATGAGCATATGCCCAATGGATCGCTTGATAAATGGATTTTCTACAAAGATCATGATTTTGTTATAGATTGGCAAACAAGACGTAGTATCATAAATGATATAGCAAAGGGACTAACATATTTACATGAAGATTGTAGACAAAAGATCGTTCATTTGGATATCAAGCCTCAAAATATACTATTGGACAAGAATTTCAATGCTAAAGTATCAGATTTTGGATTAGCAAAACTCATCAACCGAGACCAGGTTGAAGTAGTTACAAGAATGAGAGGTACCCCTGGATATTTAGCGCCAGAATGGATGACCTCGGTTATTACCGAAAAAGTGGACGTGTTTAGCTTCGGTGTCGTGGTGCTTGAAATTGTATGTGGAAGAAGGAATTTAGATTACTCAAAAGATGAAGAAGACTTCCATTTAATTAGTCTCTTGCAAAGAAAAGTTACAGAAAATAAGCTAGCGGATATGATAGATTGTCGTTGCACCAATATGCAGAGTCATATTGATGATGTTGTAATGATTATTCATCTTGCAATGTGGTGTCTCCAGAGTGACAATAACAAGCGACCGTTAATGTCCATGGTGTTAAAAGTATTAGATGGTTCTTTGGACGTGGAGGCTAATTTGGACTATAATTTCACGAACCCAACTCCTTATGTACGTAGAAATGCAAATATTATTGAATCTTTTCAGCCAACACCGTCGACTTTATCGGGACCAAGGTGA

Protein

Gene

>Asa8G00042.1
ATGCTGCAACCAAACCCAAGCTTGCTCTTCCTCTTCATCACCATCATCATCTACTCTCCTCTAAGCAGCCATGCTCAGCTGCCTTTTGATATCCCATCAGCAAATATATCGACAAAATGGATAAACAACGACCAGTCCATAAAACAGAACCTCATATTTGATGACTATTCAACCGCAAGTTCCATCCTCATAAGAAAAACACATGGTCCAACATTTGGTTGCGGCTTTATCTGCACTACTGGATCATGTACTTCCTACCTATTTTCCATTTACATAGGTTACTTAGCCCAAAGTGGGAATTCCACCTCCCCACCAATTGTATGGTCAGCCAACCGTGACCGCCCTGTTCGAGCAAATGCCACTTTAGAATTTTCCAAAAACGGGGATTTGCTTCTAAAGGATTTTGATGGCACCCCCGTCTGGTCTACTAATACTTCTGGAAAGTCAGTGGTTGGTATGAAGTTAAATGGAGTTGGAAGTCTCGTGCTTTACGATAACAAGAACAAAACTGCTTGGTCATCTCTTGATCACCCTACCGACTGTTGGGTTCTTGGCCAAACGCTGAGACAGGGTCAACGTCTGACAGCTAACGTTTCTTTTGCTAATTCGACCCAAGGTCCGTTGTATCTTAGTATTGTTACTGGTGGTTTCCAGGCATATGTTGGTTCACAATTGTATTATGACGGAACTACCTATAATCTTACCACAAGACAAGAAAAGCCCACTCATATTATGTTTAATTATAGCAGCTTAGACATATATGCTGGATCCAACAAACCAGTTGCATTATGGTTACACGTACGATAACATATTCGGTTCAGTATATGCAACTTGATTACATGGGCCATTGATAATTTATGAGTGGAGTTCTACTGGGTGGGTTTCTTTAGGGGATGTTTTCCGGGTTGCTTATTACCACCATGATGATTATTGTACATATCCCAATGTCTGCGGAGAGAATGGAATATGTTCCAATGGACAGTGTTCTTGTCCAGCTTCGGATGATGGCAGTATAAATTACTTTAAACCGGTCGATCATACGAATCCTAACCTTGGTTGCGTGCCATTTAATGCTCTTTCATGCAACTCATCCAAAACACATAAACTTTTATCGCTCTTCAATGTATCTTATTTCTCCATCGATCGAGGAGCAGCCCCGTACAATAACAATACAAATGCTGAAGCTTGCAAGCAAGCATGTTTGGCAAACTGTTCTTGCAAAGCTGCATTTTTTCAATATGATAATGAAGAGAAAGATTTTGGAACTAACTGTTACTTGGAATACGAGTTGTATTCGTTGAATGGCAATCTACCACATTATAACAACATATATTCATCTGCATTTATCAAAGTGCAATCATTTCCTACTACAAATATGGCATCTAGAACAAACTCCAGTAACTCTAACTTTATACGAAGTAAAGTTAGCGTTAGAGTTATAGCTGGTGCTAGCGTCGCATCTCTACTTGCTTTTATTCTTATCATTGCATGCGCCATAGCTTTTGTGAGGAGAAAATATAGTTATAGAGAAGTTGAGGATGTTGATGAATTCGCTATGTTACCTGGACTACCTACAAGATTTGCCTTTGAAGATCTTAGGGTTGCTACTGCCGACTTCTTACGAAAACTTGGGGAAGGTGGATTCGGTTCGGTTTTCGAAGGAACACTAATTGATGGTACTAAAGTAGCCGTTAAAAGATTAGACAGTGCTGGTCAAGGTAAAAAGGAATTTTTAGCCGAGGTTGAAACCATTGGTAGCATTCATCATGTACATTTGGTGAGATTGATTGGATTTTGTGCAGAAAAGTTTTATAGGCTTTTGGTTTATGAGCATATGCCCAATGGATCGCTTGataaatggattttctacaaaGATCATGATTTTGTTATAGATTGGCAAACAAGACGTAGTATCATAAATGATATAGCAAAGGGACTAACATATTTACATGAAGATTGTAGACAAAAGATCGTTCATTTGGATATCAAGCCTCAAAATATACTATTGGACAAGAATTTCAATGCTAAAGTATCAGATTTTGGATTAGCAAAACTCATCAACCGAGACCAGGTTGAAGTAGTTACAAGAATGAGAGGTACCCCTGGATATTTAGCGCCAGAATGGATGACCTCGGTTATTACCGAAAAAGTGGACGTGTTTAGCTTCGGTGTCGTGGTGCTTGAAATTGTATGTGGAAGAAGGAATTTAGATtactcaaaagatgaagaagactTCCATTTAATTAGTCTCTTGCAAAGAAAAGTTACAGAAAATAAGCTAGCGGATATGATAGATTGTCGTTGCACCAATATGCAGAGTCATATTGATGATGTTGTAATGATTATTCATCTTGCAATGTGGTGTCTCCAGAGTGACAATAACAAGCGACCGTTAATGTCCATGGTGTTAAAAGTATTAGATGGTTCTTTGGACGTGGAGGCTAATTTGGACTATAATTTCACGAACCCAACTCCTTATGTACGTAGAAATGCAAATATTATTGAATCTTTTCAGCCAACACCGTCGACTTTATCGGGACCAAGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008791435.1	5.6e-220	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Swissprot	Q8RWZ5.1	1.1e-106	S-domain-2 (SD2) receptor kinase 5
trEMBL	A0A8N4F5E6	8.4e-210	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32300.1	34.51	5e-102	369	SD2-5	S-domain-2 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G00042	AT4G32300.1	762	353	22	66	721	49	770	34.51	5e-102	369
Asa8G00042	AT1G34300.1	525	309	12	212	725	260	766	35.62	1e-81	301
Asa8G00042	AT1G34300.1	105	68	2	94	198	62	162	31.43	3e-06	51.2

Ortholog group

Species	Genes
Allium cepa	g473876.t1
Allium fistulosum	AfisC6G00048
Allium sativum	Asa0G03436.1; Asa6G01779.1; Asa6G01988.1; Asa7G06095.1; Asa8G00042.1; Asa8G05446.1; Asa8G05978.1; Asa8G05979.1; Asa8G05990.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	106	195	77.6	5.7e-22
PF08276.8	PAN_2	Domain	290	334	24.0	2.7e-05
PF00069.22	Pkinase	Domain	449	713	172.0	1.4e-50

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network