result

Gene information

Detail information of Asa8G00797

Location

Gene	Chr	Start	End	Strand
Asa8G00797	chr8	242108741	242110432	+

Sequences

CDS

>Asa8G00797.1
ATGTTAAGTTCTCTCTTCACTCCTGGTAAAAATGATTCTGATTTTGACTGCCAGAATTATGGATTCTTAGATGAATCGGAAAACAAATCATATCATGTCTTCTCTAGAGAAACTACAAATACTGACAATAGAGTTGGAGGAGAAATCAAAGATCTATGGTCAAATTATGGCTATTACTCTTTATGCCATGACACGCAAGAGCAAATGCATCGAGATCCTATGGGAATTGATGACTGTAACTTTCATGCGATATCTAATGATATGCCAATGCTTGAAATTCCTCTGCCGACTAAATATGAAGTATCTGATTTTTTTTCAGTTGAAGAGAAGCTGTCATCAACATCTTTCAGAATATCAAACGAAAGAAGCCAAATAAACGAAACTGAATTGTCAACTGAAGAGGTGATGAGAATAGCAGCTGCTCATTTCATACAGTCATCTTCCCTTCCAGATGTTGAAACTTCATCAAATAGATTTCCTTTTGGCGTATCGCTGTCTAATTTAAGCACCGAAGAAACTAAAAATGTTGAGTTAGCAAGCTTTTTACTAGCAATGGCTGAGAAAGTGTCGAATCAACAATATGACAGGGCAAGCAATCTCCTCAGGGAATGCTCCAGCTTGTCTTCCAGTACAGGAAATCCAGTTCAAAGGGTAGTTTATTATTTCTGTGAAGCACTTCAAGAAAAAATAGATCGAGAAACTGGAAAATTGTCAATGAAAGAGAACACTAATATTGGATCACTGACACCAGAAAAAGCAATCAAAGCAATGCTAACAGACAACCCCTTGCATCTGATTACTCAAAAGTATCTTCCTTATGCACAAATCATTCAATTCACAGCAGCCCAAGCCATTATAGACAACGTAGCTAATGCTAAAAGAATCCACATAATTGATTTTTCCATCAAGTTAGGTCTCGAGTGGACTATTCTACTGCAAGCACTGGCATCTCGACCTTCATGCTCAGTCGAGTCTGTAGCTATCAGTGCAGTGGGAGCAACAGAAGAAGTGATTGCCACAACAGGGAAAAGGCTGACTAGCTTCGCAGAGAGTTTAGGAATACCATTCAGTTTCAAAATGGTGATTGTATCCGGAATGGAGGAATTAAAAGAAACGAGCTTTGAGGTCAAGGAAGATGAAGTGATTGCATTATACTCTTGCATGACTGCGAATACTATGATAGCGAGGCCAGATTGTTTAGACACTTTGATGAGAGTGGTATGCAAGCTTCGGCCTTGTGTGATGATAGTTGTAGACTGTGAGGCCAATCATAACTCACCTTACTTTATAAACAGATTCACTGAGGCGTTGTTTTACTTCAGTGCAAAGTTCGACTGCATAGACAACATGTTGGATAGAAGCGACGAAAATAGGATATCGTTTGAGACGATCCTCTTGGGCCAAGGGATTAGGAATATAGTAGCAACAGAAGGCAAAGAAAGGATAGTTAGGCAAGTGGGGATACGCATTTGGAGAAAGTTTTTCGCAAGGTTTGGACTCGTTGAAGCTAATCTAAATGAGTATTCGGTGTATCAAGCTAGTCTAATTAGTAAACAGTTTGTAAATGGGGAGCATTGTACCTTACAAAAAGATGGAAAAACTCTGGTCACAGGGTGGAAAGGTTCGCCTATGCACTTTATTTCTGCATGGAAATTTCAAAAGAAGGAAGTTAGAGGGCATTATGAACTGTGA

Protein

Gene

>Asa8G00797.1
atgttaagtTCTCTCTTCACTCCTGGTAAAAATGATTCTGATTTTGACTGCCAGAATTATGGATTCTTAGATGAATCGGAAaacaaatcatatcatgtcttCTCTAGAGAAACTACAAATACTGACAATAGAGTTGGAGGAGAAATCAAAGATCTATGGTCAAATTATGGCTATTACTCTTTATGCCATGACACGCAAGAGCAAATGCATCGAGATCCTATGGGAATTGATGACTGTAACTTTCATGCGATATCTAATGATATGCCAATGCTTGAAATTCCTCTGCCGACTAAATATGAAGTATCTGATTTTTTTTCAGTTGAAGAGAAGCTGTCATCAACATCTTTCAGAATATCAAACGAAAGAAGCCAAATAAACGAAACTGAATTGTCAACTGAAGAGGTGATGAGAATAGCAGCTGCTCATTTCATACAGTCATCTTCCCTTCCAGATGTTGAAACTTCATCAAATAGATTTCCTTTTGGCGTATCGCTGTCTAATTTAAGCACCGAAGAAACTAAAAATGTTGAGTTAGCAAGCTTTTTACTAGCAATGGCTGAGAAAGTGTCGAATCAACAATATGACAGGGCAAGCAATCTCCTCAGGGAATGCTCCAGCTTGTCTTCCAGTACAGGAAATCCAGTTCAAAGGGTAGTTTATTATTTCTGTGAAGCACTTCAAGAAAAAATAGATCGAGAAACTGGAAAATTGTCAATGAAAGAGAACACTAATATTGGATCACTGACACCAGAAAAAGCAATCAAAGCAATGCTAACAGACAACCCCTTGCATCTGATTACTCAAAAGTATCTTCCTTATGCACAAATCATTCAATTCACAGCAGCCCAAGCCATTATAGACAACGTAGCTAATGCTAAAAGAATCCACATAATTGATTTTTCCATCAAGTTAGGTCTCGAGTGGACTATTCTACTGCAAGCACTGGCATCTCGACCTTCATGCTCAGTCGAGTCTGTAGCTATCAGTGCAGTGGGAGCAACAGAAGAAGTGATTGCCACAACAGGGAAAAGGCTGACTAGCTTCGCAGAGAGTTTAGGAATACCATTCAGTTTCAAAATGGTGATTGTATCCGGAATGGAGGAATTAAAAGAAACGAGCTTTGAGGTCAAGGAAGATGAAGTGATTGCATTATACTCTTGCATGACTGCGAATACTATGATAGCGAGGCCAGATTGTTTAGACACTTTGATGAGAGTGGTATGCAAGCTTCGGCCTTGTGTGATGATAGTTGTAGACTGTGAGGCCAATCATAACTCACCTTACTTTATAAACAGATTCACTGAGGCGTTGTTTTACTTCAGTGCAAAGTTCGACTGCATAGACAACATGTTGGATAGAAGCGACGAAAATAGGATATCGTTTGAGACGATCCTCTTGGGCCAAGGGATTAGGAATATAGTAGCAACAGAAGGCAAAGAAAGGATAGTTAGGCAAGTGGGGATACGCATTTGGAGAAAGTTTTTCGCAAGGTTTGGACTCGTTGAAGCTAATCTAAATGAGTATTCGGTGTATCAAGCTAGTCTAATTAGTAAACAGTTTGTAAATGGGGAGCATTGTACCTTACAAAAAGATGGAAAAACTCTGGTCACAGGGTGGAAAGGTTCGCCTATGCACTTTATTTCTGCATGGAAATTTCAAAAGAAGGAAGTTAGAGGGCATTATGAACTGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008813391.1	1.6e-134	DELLA protein RGL1-like
Swissprot	A0A396IUP1.1	4.5e-46	DELLA protein 1
trEMBL	A0A8B7D575	1.1e-134	DELLA protein RGL1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G14920.1	29.85	2e-49	193	GAI;RGA2	GRAS family transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G00797	AT1G14920.1	392	248	8	168	552	159	530	29.85	2e-49	193
Asa8G00797	AT3G03450.1	451	283	10	122	552	117	546	28.16	9e-49	191
Asa8G00797	AT2G01570.1	391	254	6	168	552	211	582	28.64	1e-48	191

Ortholog group

Species	Genes
Allium cepa	g135749.t1
Allium fistulosum	AfisC6G06790
Allium sativum	Asa6G05796.1; Asa8G00797.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03514.11	GRAS	Family	180	551	290.6	1.5e-86

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14494	DELLA; DELLA protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network