Detail information of Asa8G00804


Location
GeneChrStartEndStrand
Asa8G00804chr8244342269244347832+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAEA11233.11.1e-91knotted-like homebox protein
SwissprotA2Y007.27.3e-85Homeobox protein knotted-1-like 2
trEMBLA0A8B9AYA03.2e-93homeobox protein knotted-1-like 1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G23380.152.428e-63 237KNAT6;KNAT6L;KNAT6SKNOTTED1-like homeobox gene 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag329298.t1
Allium fistulosumAfisC6G06785
Allium sativumAsa8G00804.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g19694.1; LOC_Os05g03884.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03790.10KNOX1Family306944.21e-11
PF03791.10KNOX2Family7912472.61.4e-20
PF03789.10ELKDomain17119133.03.8e-08
PF05920.8Homeobox_KNFamily21024961.35.1e-17

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16670MEIS2; homeobox protein Meis2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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