Detail information of Asa8G01152


Location
GeneChrStartEndStrand
Asa8G01152chr8333942495333964621+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276718.12.0e-162increased DNA methylation 1-like isoform X1
SwissprotF4IXE7.11.2e-71Repressor of silencing 4
trEMBLA0A5P1EA011.4e-162PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G58610.132.642e-97 354PHD finger transcription factor, putative

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag370605.t1
Allium fistulosumAfisC6G06183
Allium sativumAsa8G01152.1
Arabidopsis thalianaAT5G63900.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily32739661.65.3e-17
PF00628.26PHDDomain44048130.52.3e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11642CHD3, MI2A; chromodomain-helicase-DNA-binding protein 3EC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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