Detail information of Asa8G01198


Location
GeneChrStartEndStrand
Asa8G01198chr8340461323340465183-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020254718.13.8e-55zinc finger CCCH domain-containing protein 32-like
SwissprotQ6K977.26.1e-34Zinc finger CCCH domain-containing protein 19
trEMBLA0A5P1FP882.7e-55Zinc finger CCCH domain-containing protein 17

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G02160.144.795e-36 149CCCH-type zinc finger family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag163043.t1; g310563.t1
Allium fistulosumAfisC1G09103; AfisC7G04153
Allium sativumAsa3G01682.1; Asa8G01198.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF15663.2zf-CCCH_3Family146752.44.8e-14
PF14608.3zf-CCCH_2Domain9511310.20.77

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.