Detail information of Asa8G01438


Location
GeneChrStartEndStrand
Asa8G01438chr8408015839408046970-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009421382.11.9e-83PREDICTED: E3 SUMO-protein ligase SIZ1
SwissprotQ680Q4.22.9e-76E3 SUMO-protein transferase SIZ1
trEMBLA0A6V7Q9Z62.2e-84E3 SUMO-protein ligase SIZ1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G60410.145.982e-78 289ATSIZ1;SIZ1DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain

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Ortholog group
SpeciesGenes
Allium cepag283466.t1; g41105.t1
Allium fistulosumAfisC6G05988
Allium sativumAsa8G01437.1; Asa8G01438.1
Arabidopsis thaliana
Oryza sativaLOC_Os07g25890.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02037.24SAPFamily124438.46.4e-10
PF00628.26PHDDomain10415730.42.3e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003676Fnucleic acid binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04706PIAS1; E3 SUMO-protein ligase PIAS1EC:2.3.2.- Ubiquitin mediated proteolysisko04120
Jak-STAT signaling pathwayko04630

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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