Detail information of Asa8G01640


Location
GeneChrStartEndStrand
Asa8G01640chr8467197160467203606-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265896.13.2e-71GATA transcription factor 20-like isoform X2
SwissprotQ5Z4U5.16.7e-58Protein TIFY 2b
trEMBLA0A5P1EZL73.9e-71GATA transcription factor 28-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G21175.260.485e-47 183GATA24;TIFY2B;ZML1;ZML1ZIM-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag17695.t1; g186411.t1
Allium fistulosumAfisC6G05599
Allium sativumAsa8G01640.1
Arabidopsis thalianaAT1G51600.1; AT1G51600.2; AT3G21175.1; AT3G21175.2; AT3G21175.3
Oryza sativaLOC_Os02g05510.1; LOC_Os02g05510.3; LOC_Os06g48534.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06203.11CCTMotif388060.01.5e-16
PF00320.24GATADomain11314851.16.5e-14

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17604ZSWIM3; zinc finger SWIM domain-containing protein 3EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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