result

Gene information

Detail information of Asa8G01662

Location

Gene	Chr	Start	End	Strand
Asa8G01662	chr8	470894532	470898783	+

Sequences

CDS

Protein

Gene

>Asa8G01662.1
ATGGCTAGAAAGAATTACTTTGGCCATTTTATACAATTGTTGTTTCTCATAGTTACATCGCCATTAGTATCATCCAAGACCGAAACAGATGTTCTCTTGGAATTCAAATCCTCACTTTCTTTCAATAGAAATGAAGACTCCTTACGCAGTTGGAACTCCGGATCAAACCCATGCAAGATTAATGACTCCAAATGGAAGGGTGTAACGTGCCAAAACAACCAGGTGTGGAAACTACAGCTTGAGAACATGGGACTTGTAGGGCAACTCAACCTAGATGCTTTATCTAACCTACCTATCCTTCGTGCCATAAGTTTCGCAAATAACCTCTTAGTTGGGGCAATGCCCGATATATCGAAGCTCGGTGCACTTAAAGTGCTGTACTTGTCTAATAACAAATTTTCTGGGGTCATTCCTGATGATGCTTTTTCAGGAATGCGGTCACTGAAAACAGTATACATTTCCAGTAATCGATTTAGTGGAAACATACCTTCATCTTTGGCAAGGCTTTCAAAGCTTCTCGATTTGGGGTTGGATTCAAATGAGTTTGAAGGCGAGATTCCTGATTTCAAACATGCTATAGGATTACGGATGGTTAATGTTTCGTATAATAAGTTAGAGGGAAGAATTCCTGATTCTTTGAAAAACATGAACCAGAACTGGTTTGCAGGTAACTTTTCGAAATTTATTCTTCAGTTTAAACTATAATTTTCTCATCGTTTCGGGCCACTTGGAGTACTTATTTATATTTCAGCTTGTTTCAATACTACTACAAGTCTACAAATATATTTTGGTCTCTGCCCACATGGCTAAAAGTGACCAAATTACATTGGTGCTATTTCTGACAACAATTATAATAACAATGCGCTGGTGCATTTGGAATAACATCAGTATATTATTGTCACATTGATCCATGTTATAGAAATAGAAAGTGATATATTTGAAAATagtgttgaaaataatttaaaatgcaaGTAAGTTTACAAAAGTGGTTGTCAAGGACCGCTATGTCATGGTGATATATCTGTGGTTCTAGAGGTTTTGGGTTTGATTCTTACAGACATCAAAATGAGTCTCTACATAAATTAATTGTCACTTTTGTtatcaaaataaagttttcaaaagCGGTATGTTTGATAACTCTAATTTAAACCTGCAACTGTACGTATAAAAGGGAATGCAAATTACAAAGAAATCGATCATATTATATTTCATTGACATCTAATGGAATTTAACCTTTTCTACTCAATGCAGGAAACAAGAATCTCTGTGGCGTTCCACTTAATGCTATATGCCCATCGTACAAAAAATCCCGAGCTATTCTTGTTGATATCATAGTAGCTTCTATTTTTGCTTCCATAATTATATTATGCATCATTTTCTCACTTATTAGGTGCTGTAAAAGCAAACGAATCAATTCTAAAAGCATCGATATCGATATTGTGTCAGTAGAAAGTTCAGTGTCTAGCAAAATAAGCATCAGTAGTAATATAAACAAAGTTTTCCCTGAAAAATTATCATTCgttaaggaagaggaagaaaagtttGATATGCAAGATTTATTGAAAGCTTCAGCTGTAATACTGGGAAATGGAAATTTTGGATTTTCATATAAAGCAGTCCTGAAATCTGGACCTTCAGTTGTGGTCAAGAGATATACAGATATGAACAGAGTTGGAAGAGATGATTTTCAAGAACATATTAAAAGACTTGGTAAACTGAATCATGCTAATGTTTTGCCTATTCTGGCCTATTGTTATAGAAAGGAGGAGAAGTTGATTGTATTGAGATATGTAGTAAACAAGAGCTTGACTCACATACTCTATGGTAATCAGTCATATAATTAATATTCCTCAACCACTTTAGAAACTTTTGCATGCTTCTTTTTTTTGAACAATGTTCTATCTATTTTACAGGAAATTCTGGGACTAATGTTACTTCTTTAGGGTGGGCAAAGAGATTAAAAATTATCAGAGGAGTAGCAAGAGGACTTGCATATCTACATGAAGAGCTATCTATGTTGACTCTGCCTCATGGACACCTTAAATCTTCGAATGTGCTTATCGATGAGAATTATGAACCTTTACTAACAGACTACGCTCTCTTACCAGTTGTGAACCATAGTACCGTCTCAAAAAATTTGATTGCATACAAGTCTCCAGAAGTTGGTAGAATGATTCAACCATCTAAAAAGAGTGATGTATGGAGTTTTGGGAGATTGATAATTGAGATACTAACAGGTATTTTCCTTTGATCTTCATTTACACAAATCAtggaattaaaaatttcagttaaCATGATTTTAGTCCCTAGTCAATTGATTTAGCAAACAAATTTATATGGATCTCTTAACCAACATTAAATGAATTTGTCAGTTTTGTTAGCCAATAGAATCTTAACTTAATAACCGAATAATTGTCAGACTGGCGAAAGCGTTCTcgaatattgaatttaatttagccTGTAAAGCAATCAAAAGCCAAAAGGTAGCTAATTTGGTCAAAACAACGAGATACAAACGCTGCTCAGCGATGACATTATCTTTTTGTCCTCCCATTTGAGGTAGGTGTTGAATATTAGAAAACTAAGGTCGTGAATGTGTTTTTTAATGCGATGTTGTAATAATCTTTTCAGGCTCCCGTCCAGACCCTGCCTAAGGCACTAGGCTAGCATATCCATTGAAATTTTTGCCCAATCTATTTAGTTGAGACTTGCTATATTACCTAAACATACGAACATGTTTATAAGAGCCGTTTATGCATCAATTTAGACTTGGTTCTTCTTATAAACATCGAAATGTTTGATTCAAGGGGTTTTTCCTCGTGTTTTCTTCCAAAAAATATGCACACTTATAAGATTTCGTTCTGGATCAGGaaatactaataaaatattaatttttttatctaaAATATGTTTGAGTTTATCAAGTACACATAGTTTTCATTAGCCCCCACATAGACATTAATCTTTAGTCCATGCTTTCAGTGTAGCGACTTTTCCAATCTGGATTTTTTcctttgaaatttcaatatttttactattttagaTAGCTTTGAAAACTTTCTTCCAGAGTTTTCTTGGTCATCAATACGAGGACCTGTCCAACATAGAACTGATCTGATTCTCAGCAGATAATTAAGATCATTTTTGATTACATGGCTGAAAATgatcaaaatatattaatattatacggGAGCGTCAATATAAAtctaaaaatgaaaaataacagcGCTATTTGAAATACCgtaaacttataaataaaaaacGCATTGGCTCACATTTGAAATAGAGCCAGTATAGCATGGTAGTTAATagcgtatttgttattatttttaaagtgacatatttatgttaaagaaagttttaattatttttaaagtgaCATATTTATGTTGAGGGAAGTTTTGTCAAACACCTTTCTAAGTTTAAAAATACACCATAGTCCCTTGTAATAAACAGATTCCATGAACCAACATGAGGGTGTTCTCAGGAAAATTTgcaattcccccccccccccccccaacatgAGGGTGTTCTCAGGAAAATTtgcaatccccccccccccccccccccccaatatttgTGGGGAAAAAAATGCAAATATTAAATATACTTCGCCCTTTTCAAACTAAATTGTATGAACATCCTTTGAAGTATATTCAGGGAAATATTTGCAACGCTAAAAACTAAATACTTGCAGAAAAAAGTTGCACTAAGGGTACAAAGTATCCATGCAAATACAGAAAATTTGCAAACTGCAAATATTGCACTGAAACTGCAGATTTTCGCTGGAAATAATCATGTGTATCTCGTGAAACTTGTTTACAACCCTTAAAACAAGGGTGTGCCTTAATTCCGActttatgttattaatttaaaaaattgtcTTGCATTGATGAAAGTTAACTGGAGGCACATTGTGTATTTAACAGGTAAGTTGCCCCCTACATATCTACAAAATGGAATAGAAGACGCCGATTTGAGAGAATGGGTAAAATCAGTTGTGAATGAAGGAGGAGAAAATTTTGATGGTAAAATGGAGATGAAAAATGAAGGaagtgaaatgttgaaattgttGGAGATCGGATTAAAATGTTGCGAGGTTGATGTGGACAAAAGGATGGAAATGAAAGAAGTAGCTGTAAAAATTGAGGAGTTAGAAGAGGTCAACGTTAGTGATAACGACGTTGAAGATTCTTCTTTTCTGAGTGAAGTTGATTTGTATTCATCAACTGATTATTTCTCCTTTTCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010913795.1	1.1e-139	pollen receptor-like kinase 1
Swissprot	Q84JQ4.1	1.0e-107	Pollen receptor-like kinase 2
trEMBL	A0A6I9QV51	7.6e-140	pollen receptor-like kinase 1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G35390.1	44.99	2e-141	499	PRK1	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G01662	AT5G35390.1	649	298	13	14	621	21	651	44.99	2e-141	499
Asa8G01662	AT4G31250.1	655	317	13	13	617	15	660	42.60	3e-138	489
Asa8G01662	AT3G20190.1	643	317	13	10	611	22	659	43.55	2e-133	473

Ortholog group

Species	Genes
Allium cepa	g269277.t1; g273941.t1; g321814.t1
Allium fistulosum	AfisC4G00829; AfisC4G04922; AfisC6G05589
Allium sativum	Asa4G00711.1; Asa5G04205.1; Asa8G01662.1
Arabidopsis thaliana	AT1G50610.1; AT2G07040.1; AT3G20190.1; AT4G31250.1; AT5G35390.1
Oryza sativa	LOC_Os02g07810.1; LOC_Os06g45240.1; LOC_Os08g40990.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	26	70	42.4	5.8e-11
PF13855.3	LRR_8	Repeat	123	181	36.9	2e-09
PF00069.22	Pkinase	Domain	332	590	96.2	1.8e-27

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network