Detail information of Asa8G01756


Location
GeneChrStartEndStrand
Asa8G01756chr8495222109495222521-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrOAY77620.12.0e-22Paired amphipathic helix protein Sin3-like 4, partial
SwissprotQ9LFQ3.23.3e-22Paired amphipathic helix protein Sin3-like 2
trEMBLA0A6P5F4D51.5e-22paired amphipathic helix protein Sin3-like 4 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G24190.145.453e-23 103ATSIN3;SIN3;SNL3SIN3-like 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag329239.t1
Allium fistulosumAfisC6G02960
Allium sativumAsa8G01756.1
Arabidopsis thalianaAT1G24200.1; AT1G24210.1; AT1G24230.1; AT1G70030.1; AT5G15040.1
Oryza sativaLOC_Os08g25200.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02671.18PAHRepeat368059.03.3e-16

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11644SIN3A; paired amphipathic helix protein Sin3aEC:- Mitophagy - yeastko04139
Thyroid hormone signaling pathwayko04919

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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