Detail information of Asa8G01788
| Gene | Chr | Start | End | Strand |
|---|
| Asa8G01788 | chr8 | 502417015 | 502458297 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_021298245.1 | 3.1e-22 | protein LSD1 |
| Swissprot | Q2QMB3.1 | 1.5e-13 | Putative zinc finger LOL2 |
| trEMBL | A0A6J1BG34 | 2.2e-22 | protein LSD1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT4G20380.2 | 59.24 | 2e-48 | 188 | LSD1 | LSD1 zinc finger family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| Asa8G01788 | AT4G20380.7 | 184 | 58 | 4 | 1 | 167 | 6 | 189 | 59.24 | 2e-48 | 188 |
| Asa8G01788 | AT4G20380.2 | 184 | 58 | 4 | 1 | 167 | 6 | 189 | 59.24 | 2e-48 | 188 |
| Asa8G01788 | AT4G20380.6 | 184 | 58 | 4 | 1 | 167 | 1 | 184 | 59.24 | 2e-48 | 187 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF06943.9 | zf-LSD1 | Domain | 7 | 30 | 41.5 | 7.5e-11 |
| PF06943.9 | zf-LSD1 | Domain | 46 | 69 | 43.5 | 1.8e-11 |
| PF06943.9 | zf-LSD1 | Domain | 84 | 108 | 53.4 | 1.5e-14 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K12191 | CHMP2A; charged multivesicular body protein 2A | EC:- | Endocytosis | ko04144 |
| Necroptosis | ko04217 |