Detail information of Asa8G01937


Location
GeneChrStartEndStrand
Asa8G01937chr8544095803544099280+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009393272.14.2e-54PREDICTED: MADS-box transcription factor 29-like isoform X2
SwissprotQ8VWM8.13.7e-47MADS-box protein ZMM17
trEMBLA0A8J5GQG96.1e-55MADS-box transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G20240.141.521e-36 150PIK-box region and MADS-box transcription factor family protein

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Ortholog group
SpeciesGenes
Allium cepag315620.t1
Allium fistulosumAfisC6G05313
Allium sativumAsa8G01937.1
Arabidopsis thaliana
Oryza sativaLOC_Os02g07430.1; LOC_Os04g52410.1; LOC_Os04g52410.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105791.91.1e-26
PF01486.14K-boxFamily8216256.91.7e-15

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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