result

Gene information

Detail information of Asa8G02123

Location

Gene	Chr	Start	End	Strand
Asa8G02123	chr8	599654770	599655944	+

Sequences

CDS

>Asa8G02123.1
ATGTCAAGTTTGATCAAAACAACGCGTATGCGTGCGTGCGACAACTGCGTGAGGCGCAGAGCGCGGTGGTACTGTGCAGCTGATGATGCCTTCCTGTGCCAGAACTGCGACTCCTCGGTCCATGGTGCTAATCCACTTTCACGCAGACATGACCGAGTCAGACTTCATCATAACAGTTCATTAAAGGAGGAAAGAAAGGTTGCAAGGACATGGCCTGCATGGCACCATGCATGTAAACGCAAAGCGCGTACTCCTAGAAGGGGTAAGAAGTTTAGGGCGGTTTCTTCTTCGGTGGTGCCCGAATTGGAGACCGAGTCTTGTGGAGAGGAGAGACAGTTGTATTTGGTTCCGGTACTCGATGATGATGGTAAGAATTCTGAAAGTGTTGATGGTGAGTATTGCTTTGCTGGGTTTACGCCATCGGAGAAGGAGCTTGAGGAGTTTGCGGCTGATATGGAGAGTTTGCTTTGGAGAGGAGTTGGTAATAGCGAAACGTTTTCCCTGGAGGAGTTGGGAATGGTAGATGATGAAAAGCGCTGTTGTGCTGAAACTGGTGAAGTGAAGGGAGAAAATGATAATAATGATAAAACTTATGGGGAAATTTATGTATGTGAAGAGACCGGGGATACGAATTTCGAGTATGAGAATGAGCTTGGAACTGTGGGAGAGGAAGAGAAGGAAGAGAGGAGGAAGAGGATTGGACTGAGGCTGGATTATGAAGCGGTGACGGAAGAATGGTGTGCTAGTAACTATGGGGAAGAGTCATCGCCGTGGATGGATGGAGAACGGCCGCAGTTTGGGCCGGATGATTTCTCCATTGATTGCACGGAAATGTGGGGAGAAGGAGGGGAGATGGAGTTAGGGGCAGCACAGAGCCAAATGGACATGTTTGGAAGAAATAGCCGGAGTTTTGATGAAGGAAGGAAAGCAAGAGTCAGTAGGTACAGGGAGAAGAGGAGAACGAGGCTGTTTTCAAAGAAAATAAGGTATGAGGTTAGAAAGCTGAATGCGGAGAAACGGCCGAGGATGAAGGGCAGATTCGTTAAGAGATCTTCTTTATTACATGCTTCGTCCTAG

Protein

Gene

>Asa8G02123.1
ATGTCAAGTTTGATCAAAACAACGCGTATGCGTGCGTGCGACAACTGCGTGAGGCGCAGAGCGCGGTGGTACTGTGCAGCTGATGATGCCTTCCTGTGCCAGAACTGCGACTCCTCGGTCCATGGTGCTAATCCACTTTCACGCAGACATGACCGAGTCAGACTTCATCATAACAGTTCATTAAAGGAGGAAAGAAAGGTTGCAAGGACATGGCCTGCATGGCACCATGCATGTAAACGCAAAGCGCGTACTCCTAGAAGGGGTAAGAAGTTTAGGGCGGTTTCTTCTTCGGTGGTGCCCGAATTGGAGACCGAGTCTTGTGGAGAGGAGAGACAGTTGTATTTGGTTCCGGTACTCGATGATGATGGTAAGAATTCTGAAAGTGTTGATGGTGAGTATTGCTTTGCTGGGTTTACGCCATCGGAGAAGGAGCTTGAGGAGTTTGCGGCTGATATGGAGAGTTTGCTTTGGAGAGGAGTTGGTAATAGCGAAACGTTTTCCCTGGAGGAGTTGGGAATGGTAGATGATGAAAAGCGCTGTTGTGCTGAAACTGGTGAAGTGAAGGGAGAAAATGATAATAATGATAAAACTTATGGGGAAATTTATGTATGTGAAGAGACCGGGGATACGAATTTCGAGTATGAGAATGAGCTTGGAACTGTGGGAGAGGAAGAGAAggaagagaggaggaagaggatTGGACTGAGGCTGGATTATGAAGCGGTGACGGAAGAATGGTGTGCTAGTAACTATGGGGAAGAGTCATCGCCGTGGATGGATGGAGAACGGCCGCAGTTTGGGCCGGATGATTTCTCCATTGATTGCACGgtatgtatgttttatttttatttgaaattcactCATATTGATGCATGCACTTGTAAACCTGGCTAGAGTAGTACTTATAAATTGGAATGTACATGCAGGAAATGTGGGGAGAAGGAGGGGAGATGGAGTTAGGGGCAGCACAGAGCCAAATGGACATGTTTGGAAGAAATAGCCGGAGTTTTGATGAAGGAAGGAAAGCAAGAGTCAGTAGGTACAGGGAGAAGAGGAGAACGAGGCTGTTTTCAAAGAAAATAAGGTATGAGGTTAGAAAGCTGAATGCGGAGAAACGGCCGAGGATGAAGGGCAGATTCGTTAAGAGATCTTCTTTATTACATGCTTCGTCCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020270262.1	2.1e-68	LOW QUALITY PROTEIN: zinc finger protein CONSTANS-LIKE 16-like
Swissprot	Q8RWD0.2	5.2e-56	Zinc finger protein CONSTANS-LIKE 16
trEMBL	A0A8X8WC79	8.9e-61	Uncharacterized protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G25440.1	39.71	2e-61	233	BBX15	B-box type zinc finger protein with CCT domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G02123	AT1G25440.1	413	172	13	1	350	5	403	39.71	2e-61	233
Asa8G02123	AT1G68520.1	411	176	13	1	353	5	402	39.90	2e-59	226
Asa8G02123	AT1G73870.1	403	163	18	11	354	20	391	37.22	4e-47	185

Ortholog group

Species	Genes
Allium cepa	g245095.t1
Allium fistulosum	AfisC6G05114; AfisC6G05120
Allium sativum	Asa8G02123.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00643.21	zf-B_box	Domain	10	53	31.1	1.8e-07
PF06203.11	CCT	Motif	308	350	63.1	1.7e-17

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0008270	F	zinc ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12135	CO; zinc finger protein CONSTANS	EC:-	Circadian rhythm - plant	ko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network