result

Gene information

Detail information of Asa8G02160

Location

Gene	Chr	Start	End	Strand
Asa8G02160	chr8	605304961	605306669	-

Sequences

CDS

Protein

Gene

>Asa8G02160.1
ATGGTAGATCGGTGTTGGGACAACAGCAATGTCGTCGTCAACAACGGCGGCAACGGTAACATGGTTAATGGCAAAATGGAGCAACCGCACAATGCAGTGCCGGCTCCATTTTTGACCAAAACGTATCAACTCGTCGACGATCCCGCCACCGATCGCGTCGTTTCGTGGGGCGACGACGGCGTCTCTTCCTTCGTCGTCTGGAAACCGCCTGAGTTCGCCAGAGATTTGCTTCCTAATTATTTCAAGCACAATAATTTCTCTAGCTTCGTTCGCCAGCTTAACACTTACGTAAGTTCTCACCATTACTGCTCTTTTTCTTCAGAATGTTAACTAGTTTCTTGCATGCGTTTTGTTTTAAGATCGATTCTACATTTTCTGGCACTATGCATGAGTTGAGTACTTGCTTAGATACCAAAAAAGAAAATGTTGCCTTGTTTGGTATTATCTGTTCATTGAAAACTGTAAAAGAGTACATTTGTAGGCTTGGATAATTAGATTTTCAGTGTTTCCGCAAATTTTaagcttttttcttcttcttctttttttcctacTTCTTTGAATGTGCTGCCTGCTTGGTCTGGAAAATTTTGTTATGATTCAGTTACTATGCATTTATGATGCATTAATGCAAATGTTAATGACAAAATAAGATTAGGTAATACCAGGAGATATGGCTTGTGACAAAAACTCTAGACTTTTCAATCATTTTTTGAACTTTGTATGTTAAAGTAAAAGCAAATTCTTAGTACCTACTTTTTTCTAAACCAGCCTTTTTTATGGTTTTCAAACCTTATATTCCCTTAAATTTTGGTTCAAGTTATGTGAAAGTCACAACTCAATGTAAAGCATGTGGTTTCAAAACCAGCTCTGCGTTATTTTCCAAAAGAAGAACTGTATACCATTATGTGGTGAACTGTTATATTACTCTGATCATCGTCAAAGGGCTTTTAGTGTTTGTACTTTGTACATTACAACATGTACTTAATACTGTGTACATAAATATATTTCAGGGATTCAGGAAAGTAGTGCCTGAAAGATGGGAGTTCGCAAACGAGTTCTTCAGAAAAGGTCAAAGACACCTGCTATGTGAGATACACCGTAGAAAGACACCATCTTCATCGTCGGTCATGTCACCAACTTTCTGTCAAGCTCCATCGCCATTGATGCCGATTTACTACCACCAAATGCAAGTTCCCAGTGCTCAATCTCCTCGGCTCATAGCCCTAAATAACAATAGCAATAACAATAACAACAGTCctataaacaacaacaatatgaCGGCTGAATCTTTGCTAGAGGAGAATGGAAGATTAAGAAGAAACAATGCGGCGTTGCTATCGGAGTTGGCTCATATGAGGAAACTGTACAATGACATTATATACTTTGTTCAGAATCATGTGCAGCCGGTTGCTCCGAGTTCTACCTTTCTGCACGGGCTTTATAGTAATGGCGGTGGTGTGAGGAGGAATCATAATGGAGGGATGAATTCTGCGAGTACTACATCTAGTAGCTCTCTTACTATTGTTGAGGAGACCAATAACAATAATAATGGGGAGAGTAAAAGTGGGCAGCCTAAGCTATTTGGGGTGCCTTTGAAGAGAGGTTTGAATTTGGATGATGGTGCTAATGGAGCTTGTTCGTCTACAAAGCCTAGGTTGGTTTTGGAGAAGGATGATCTGGGGCTTAATTCATCTTCACCATCTCCTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009380920.1	9.0e-66	PREDICTED: heat stress transcription factor B-4c-like
Swissprot	Q9C635.1	1.4e-55	AtHsf-02
trEMBL	A0A804L048	6.5e-66	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G46264.1	50.45	2e-80	296	AT-HSFB4;HSFB4;SCZ	heat shock transcription factor B4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G02160	AT1G46264.1	337	114	10	21	322	23	341	50.45	2e-80	296
Asa8G02160	AT4G36990.1	198	94	3	30	227	8	193	46.46	7e-44	174
Asa8G02160	AT5G62020.1	289	121	10	21	291	9	258	38.41	2e-43	172

Ortholog group

Species	Genes
Allium cepa	g278467.t1
Allium fistulosum	AfisC6G05094
Allium sativum	Asa8G02160.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	37	127	105.9	1.1e-30

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009408	P	response to heat
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network