Detail information of Asa8G02548


Location
GeneChrStartEndStrand
Asa8G02548chr8708573506708584654-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264245.10.0e+00LOW QUALITY PROTEIN: auxin response factor 19-like
SwissprotQ0D9R7.20.0e+00OsARF7a
trEMBLA0A8B7CLE40.0e+00Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G19220.173.010.0 700ARF11;ARF19;IAA22auxin response factor 19

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag379527.t1
Allium fistulosumAfisC6G04732
Allium sativumAsa8G02548.1
Arabidopsis thalianaAT1G19220.1
Oryza sativaLOC_Os02g04810.1; LOC_Os06g09660.1; LOC_Os06g48950.1; LOC_Os08g40900.1; LOC_Os08g40900.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family13023172.71.7e-20
PF06507.10Auxin_respFamily256339117.02.9e-34
PF02309.13AUX_IAAFamily957104434.12.2e-08

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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