Detail information of Asa8G02605


Location
GeneChrStartEndStrand
Asa8G02605chr8726162446726166972+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264782.11.9e-106zinc finger CCCH domain-containing protein 18
SwissprotQ6K687.12.7e-97Zinc finger CCCH domain-containing protein 18
trEMBLA0A5P1EWZ91.4e-106Zinc finger CCCH domain-containing protein 18

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G24830.151.253e-92 335zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag369772.t1; g387851.t1
Allium fistulosumAfisC6G04668
Allium sativumAsa8G02605.1
Arabidopsis thalianaAT2G24830.1
Oryza sativaLOC_Os02g55000.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01585.20G-patchFamily15820153.41.6e-14

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13103TFIP11; tuftelin-interacting protein 11EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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