Detail information of Asa8G02747


Location
GeneChrStartEndStrand
Asa8G02747chr8758733452758733760+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_016493388.11.2e-29PREDICTED: protein PHR1-LIKE 1-like
SwissprotQ8GUN5.14.3e-27Myb-like transcription factor 1
trEMBLA0A1S4BX128.9e-30protein PHR1-LIKE 1-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G29000.164.651e-29 124PHL1Homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag296699.t1; g58682.t1; g58683.t1
Allium fistulosumAfisC3G04054; AfisC4G06593
Allium sativumAsa0G01185.1; Asa0G01186.1; Asa1G03501.1; Asa2G00052.1; Asa2G03139.1; Asa5G05604.1; Asa7G04199.1; Asa8G02747.1; Asa8G02748.1
Arabidopsis thalianaAT3G04450.1; AT3G04450.2; AT4G28610.1; AT5G29000.1; AT5G29000.2; AT5G29000.3; AT5G29000.4
Oryza sativaLOC_Os03g21240.1; LOC_Os07g25710.1; LOC_Os07g25710.2; LOC_Os07g25710.3; LOC_Os07g25710.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain176834.81.2e-08

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06236COL1A; collagen, type I, alphaEC:- PI3K-Akt signaling pathwayko04151
ECM-receptor interactionko04512
Focal adhesionko04510
Platelet activationko04611
Relaxin signaling pathwayko04926
Protein digestion and absorptionko04974

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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