result

Gene information

Detail information of Asa8G02873

Location

Gene	Chr	Start	End	Strand
Asa8G02873	chr8	788480119	788481189	-

Sequences

CDS

>Asa8G02873.1
ATGCCGAGCTCTCATAGCAAAATTTCTGGGAACTTTGCTAAAAAAACGTTACCTAAATCACCATATATCCATAACTCTATCCCGAAAGTCCGTAAAATTCGCATTATTTACGATGACCCGGACTTAACTGATGATTCAAGTTGTGAAGAGGACAATAGCAAACAGTTATATCCAGATCAATACCGCAAACGAGCTGTTCATGAAATCTTAATCAACTCCTCTCCTCCTCTCTCCAAGAAATCAAAGAGCTCGAAAAAGCAGAAAAGCCCTAAAACCCCACTCAAATCTGAACCCAGCGAGAAGAGCACACTTGCATCCACACCTGCATCCAAATACAGAGGGGTTCGGCAGCGTAAATGGGGCAAGTTCGCTGCAGAGATCCGTGACCCGATAAGAGGAATCAGGCAATGGCTTGGCACATTCGATACTGCAGAAGAAGCAGCTGAAGCTTACACTAATGCTTCTAGAAGACTTCAAGAAGAAAAACTGGCTTTGGAAGCTTCTAAAGGCCACATTGCAAAATCTAAGAAGGGCAAAGAAGTGAAGCAATCAGTGGAAGCTTCCGAAGCTCCCATTACCAAATCTACCAAGCCCAAAGCACGAAAACAAGTTTCTAAAGCTTCTAATGGCCACATAGCAAATCCTAACAAGTCCATGGGTTCTAATGCATCTTCAGTTGCTGAAACGACTGTTTCATTGTCCTCTGCTGAAATAAGCAGCCATATCGAGGTAGAGAAGAAGGACGATGATAGAAAGTCCACTGATATGGAACTGATGGTAGATGAAAAGAAGGCAGTTGGTAAAGAGGTGGAAATGGAGGTTGAGCCATCAATTGCGGATCTTTTCATAGAGAGAAACGTAACTGTACCCAATTCCATTTTCGAGTTTTGCAGCCTACCTGCGTCAACGGAGTTTGGGTTTGAAACGGATGATTTCTTAATGGGTGGTTTGAATAATTATACAAGGTTACGCAATGATTTTGCTGGACTGGATGAGTTATCAGATTTTGATGAATGCAATTTTCTGCTCCCAGAGTATGAGAAATCGCAGCAAATTTTTGCAGCTAGTTAG

Protein

Gene

>Asa8G02873.1
ATGCCGAGCTCTCATAGCAAAATTTCTGGGAACTTTGCTAAAAAAACGTTACCTAAATCACCATATATCCATAACTCTATCCCGAAAGTCCGTAAAATTCGCATTATTTACGATGACCCGGACTTAACTGATGATTCAAGTTGTGAAGAGGACAATAGCAAACAGTTATATCCAGATCAATACCGCAAACGAGCTGTTCATGAAATCTTAATCAACTCCTCTCCTCCTCTCTCCAAGAAATCAAAGAGCTCGAAAAAGCAGAAAAGCCCTAAAACCCCACTCAAATCTGAACCCAGCGAGAAGAGCACACTTGCATCCACACCTGCATCCAAATACAGAGGGGTTCGGCAGCGTAAATGGGGCAAGTTCGCTGCAGAGATCCGTGACCCGATAAGAGGAATCAGGCAATGGCTTGGCACATTCGATACTGCAGAAGAAGCAGCTGAAGCTTACACTAATGCTTCTAGAAGACTTCAAGAAGAAAAACTGGCTTTGGAAGCTTCTAAAGGCCACATTGCAAAATCTAAGAAGGGCAAAGAAGTGAAGCAATCAGTGGAAGCTTCCGAAGCTCCCATTACCAAATCTACCAAGCCCAAAGCACGAAAACAAGTTTCTAAAGCTTCTAATGGCCACATAGCAAATCCTAACAAGTCCATGGGTTCTAATGCATCTTCAGTTGCTGAAACGACTGTTTCATTGTCCTCTGCTGAAATAAGCAGCCATATCGAGGTAGAGAAGAAGGACGATGATAGAAAGTCCACTGATATGGAACTGATGGTAGATGAAAAGAAGGCAGTTGGTAAAGAGGTGGAAATGGAGGTTGAGCCATCAATTGCGGATCTTTTCATAGAGAGAAACGTAACTGTACCCAATTCCATTTTCGAGTTTTGCAGCCTACCTGCGTCAACGGAGTTTGGGTTTGAAACGGATGATTTCTTAATGGGTGGTTTGAATAATTATACAAGGTTACGCAATGATTTTGCTGGACTggatgagttatcagattttgATGAATGCAATTTTCTGCTCCCAGAGTATGAGAAATCGCAGCAAATTTTTGCAGCTAGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008799235.1	1.2e-23	ethylene-responsive transcription factor CRF2-like
Swissprot	Q9FK12.1	1.8e-16	Protein CYTOKININ RESPONSE FACTOR 3
trEMBL	A0A8K0IBW6	7.8e-25	Ethylene-responsive transcription factor ERF073

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G23750.1	41.61	2e-20	97.1	CRF2;TMO3	cytokinin response factor 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G02873	AT4G23750.2	137	74	2	29	159	33	169	41.61	2e-20	97.1
Asa8G02873	AT4G23750.1	137	74	2	29	159	33	169	41.61	2e-20	97.1
Asa8G02873	AT1G68550.2	200	105	7	30	229	36	216	38.00	4e-19	92.4

Ortholog group

Species	Genes
Allium cepa	g93924.t1
Allium fistulosum	AfisC6G04235
Allium sativum	Asa8G02873.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	110	158	38.5	9.1e-10

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network