Detail information of Asa8G02952


Location
GeneChrStartEndStrand
Asa8G02952chr8806056728806062164-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263972.18.1e-163protein tesmin/TSO1-like CXC 5, partial
SwissprotQ9SZD1.18.9e-114Protein tesmin/TSO1-like CXC 5
trEMBLA0A8B7C0T02.1e-152protein tesmin/TSO1-like CXC 5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G29000.146.433e-126 449Tesmin/TSO1-like CXC domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag146559.t1; g222487.t1; g331509.t1; g454037.t1; g4569.t1; g493495.t1
Allium fistulosumAfisC4G01515; AfisC4G01518; AfisC6G04123
Allium sativumAsa4G01357.1; Asa8G02952.1
Arabidopsis thalianaAT2G20110.1; AT2G20110.2; AT4G29000.1
Oryza sativaLOC_Os01g55580.1; LOC_Os01g55580.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03638.12TCRDomain9212738.97.3e-10
PF03638.12TCRDomain17821347.21.8e-12

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11600RRP41, EXOSC4, SKI6; exosome complex component RRP41EC:- RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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