result

Gene information

Detail information of Asa8G03520

Location

Gene	Chr	Start	End	Strand
Asa8G03520	chr8	942526892	942529569	+

Sequences

CDS

>Asa8G03520.1
ATGGCAACCTCATCATCTGCTGATTCTACTTCATCATCTTCGTCTTCTTCTCTTTCTCCCTCCAATCATTTAAGCAACCCTGCTTTGGCGCCTAAGAAGACAAGGGCTAAGAGAAAAAGACAAGACAGCAGTGGACATGACCAATCTGCCATCTCTCAATCCAAGAGGAGGAGCTCCATCTACAGGGGTGTCACTAAGCACAGGTTGACTGGGAGGTACGAAGCTCATTTATGGGACAAGCATTGCTGGAACAATGTTCAAACTAAAAAGGGGAAGCAAGGTGCATATGATAATGAAGAGGCAGCTGCGCGCACATATGATCTTGCTGCTTTAAAATATTGGGGGCTTGACACTGTTCTCAACTTCCATGCTAGTAGTTATACCAAGGAGTATGAAGAAATGGAACATATGTCCAGGGACGAGTACATGGCAACCTTGCGCCGCAAAAGCAGTGGTTTCTCAAGAGGTGCTTCCAAGTATAGAGGAGTTGCAAAGCACCATCAAAACGGGCGATGGGAAGCAAGGATTGGCCGTGTTCACGGCAACAAATATCTCTATTTGGGAACATTTGATACACAGGAGGAAGCAGCAAGAGCTTACGACATGGCTGCAATAGAATATAGAGGTCCAGCTGCAGTAACCAATTTTGACATAAATGACTATGTCGACAAGAGCATTGATTCTCAAAATCAGTCAAAAAGTGACCAATCAACAACTGATGACGATGTTCAACAACCACAGCAGCATCAGATTCTCGATGAATCAGTTGCGATCGAAAGCAAAAGTTCATTACCCATGATAGAACAAGAGTTTACAGATTATGATGGCTACACTAGATTGATCACTGATCATATGTTCACAGACTCGAGTACTGTTGAGACAAGTCCCATAACTTGGGGTTCTCTAACAAGTATTGACTTGGATTGCTCTAGTGATTTTCTTAGTTTCTTGAACAATGATGCGTTTATAGATGATATAGACTGCCTGTTTGATGAATATTACCTTTCTTGA

Protein

Gene

>Asa8G03520.1
ATGGCAACCTCATCATCTGCTGATTCTACTtcatcatcttcgtcttcttctcttTCTCCCTCCAATCATTTAAGCAACCCTGCTTTGGCGCCTAAGAAGACAAGGGCTAAGAGAAAAAGACAAGACAGCAGTGGACATGACCAATCTGCCATCTCTCAATCCAAGAGGAGGAGCTCCATCTACAGGGGTGTCACTAAGTAATATTCTTgttttctttcttatctttctctTTATTCACACAACTTATTATAGTATGtatgtatcaaaatataattaacgtTTGATATGATTCTGATGCAGTAGAAATCTCTAGCTTTGCTAACATACCAGTAATTCTTTTGAAGCTTTTAGATTGCTTTTGAACATTTGTATGACTTAAGTTATGTAAGTCAAAAGAATCATGCTAGTTATGACGCATATTTTGCAACATGCTAGATTTTGATATCCACTGTagttaataaaatataagaaattgaCACAATAATGTGTGCTTAATATCATGTCAAAGTGAGGATTGAGTGAGAAAGGTTACAGTTCATTTTTGACTATTTCCCATTGGTCAATACTATTTCATTCTCCTTCTGAAATTTTAAGTAAATTTAACAATACTTCTCTATCACTGAATATTTATTTCTGCTTTGTCAAACAAACAGACAAAAGCATATGTAGAAGAAACGTAAAAAACATCGATCTTTATGAAGTATAACTATGTACAGGCACAGGTTGACTGGGAGGTACGAAGCTCATTTATGGGACAAGCATTGCTGGAACAATGTTCAAACTAAAAAGGGGAAGCAAGGTAGTTACAGAATTATAAACGAAGAGATAGATTTCCCATTAAATGGTATTTATTTGTGTCATAGCACCGAAAAATACGGTCACATTCACATAAACAATCGTTGAGCCTactgaatataaatcaatttcagtgCTGTATATTAGTCACACTTGTTACTTTCTACTACCTTAATACAGGTTCATATACACTGGTTTTGTAATTTATATCAAGGAGAGTAACATGCTTTTTCCCTTGTTAATTTAGAGCTATTCATATCTGTGTCACGACAGAGCTAGGATCACAATTTAAAATTTCAGAGGCTATAATGAGTATTTTGGTCTAAATCTGCTCTGTGACACACACATGCATACTTGTTAATCATTTCTTTTAATATACGTTACCTGACTTGTTTACTTTTCATGTTGTGGGATCTGCTGCTTGATGACTGTTTCCCTCTGCAATTCCCATAGTTTATTTAGGTATGTGTTTTTACGTATAATGTGCTCATGTGACTTGCTTCACCCAATGTCTAACTGCTACTTTTCAAtcatatttgttaattaatttaatctaaCTGCTAAATCTTGACTGATTTTGAAACCCAGGTGCATATGATAATGAAGAGGCAGCTGCGCGCACATATGATCTTGCTGCTTTAAAATATTGGGGGCTTGACACTGTTCTCAACTTCCATGTAATACTTTTATTCATTACTTACACATATGGAGAGAAAAAGGATTCTTTATACTTAATATACAAGAATTACCTGTGTTATAACTTATAGCCCAGATGGGCACAACTATTTCATAGCTGAAATTCAGATGATTTCGTCCAAATAAAACATATTGAATAATATTAAAACTCAgtgttaaaaatgaaaaaaaaaaaaaaaagttctccTGTTTTACCAAATTGTATCAGTGGTATAATTAGAATTTCTCACCCTAGCATAGATTCATCATTATGTTCCTATATATCTTTATCATGATTTCTTGATGACTAACTGCCGTAATAAAAAATACAGGCTAGTAGTTATACCAAGGAGTATGAAGAAATGGAACATATGTCCAGGGACGAGTACATGGCAACCTTGCGCCGCAAAAGCAGTGGTTTCTCAAGAGGTGCTTCCAAGTATAGAGGAGTTGCAAAGtaaggttttcaaaataaataaataaacaatttgaaaaaaaaactaaagaagAAACAACAAATAGTACAAAGAACATTAGTACCCTAGAATGTGTTAATAATAATACTTCttaactttctttttatataattttccaggCACCATCAAAACGGGCGATGGGAAGCAAGGATTGGCCGTGTTCACGGCAACAAATATCTCTATTTGGGAACATTTGGTGAGATTTCTACCTACCATacatctaaatttgaattttaaaagcatTTATATGCTACATCTGTTAAAAATATGAATCGTGCTTACTAAATTTCAGATACACAGGAGGAAGCAGCAAGAGCTTACGACATGGCTGCAATAGAATATAGAGGTCCAGCTGCAGTAACCAATTTTGACATAAATGACTATGTCGACAAGAGCATTGATTCTCAAAATCAGTCAAAAAGTGACCAATCAACAACTGATGACGATGTTCAACAACCACAGCAGCATCAGATTCTCGATGAATCAGTTGCGATCGAAAGCAAAAGTTCATTACCCATGATAGAACAAGAGTTTACAGATTATGATGGCTACACTAGATTGATCACTGATCATATGTTCACAGACTCGAGtactgttgagacaagtcccataacttggggttctctaacaaGTATTGACTTGGATTGCTCTAGTGATTTTCTTAGTTTCTTGAACAATGATGCGTTTATAGATGATATAGACTGCCTGTTTGATGAATATTACCTTTCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021674378.1	5.0e-72	ethylene-responsive transcription factor WRI1-like isoform X2
Swissprot	Q6X5Y6.1	7.5e-73	Protein WRINKLED 1
trEMBL	A0A6A6L4G5	3.6e-72	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G54320.1	70.15	3e-75	278	ASML1;ATWRI1;WRI;WRI1	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa8G03520	AT3G54320.3	201	54	2	30	224	32	232	70.15	3e-75	278
Asa8G03520	AT3G54320.1	201	54	2	30	224	32	232	70.15	3e-75	278
Asa8G03520	AT5G17430.1	211	79	2	51	257	201	411	60.66	3e-68	255

Ortholog group

Species	Genes
Allium cepa	g504624.t1
Allium fistulosum	AfisC6G03459
Allium sativum	Asa8G00131.1; Asa8G03520.1
Arabidopsis thaliana	AT1G16060.1; AT1G79700.1; AT3G54320.1; AT3G54320.3
Oryza sativa	LOC_Os11g03540.1; LOC_Os12g03290.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	59	115	29.5	5.8e-07
PF00847.17	AP2	Domain	158	209	47.8	1.1e-12

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network